←Back to structures
ERMGT119_2_scaffold_6_prodigal-single.1__X__X__00297
Bact-VirERMGT119_2_scaffold_6_prodigal-single.1__X__X__00297
Identity
- Kingdom:
- phage
Quality
84.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 29-161
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wjqA00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.64 | 56.0 | 4.83e-01 | 100.0% | 61.0% |
| 3mswA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.63 | 46.0 | 4.61e-01 | 94.7% | 72.7% |
| 3sybA00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.63 | 58.0 | 4.07e-01 | 100.0% | 63.2% |
| 3jtyB01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.61 | 57.0 | 4.04e-01 | 100.0% | 46.2% |
| 5dl7A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.61 | 55.0 | 3.90e-01 | 99.2% | 38.1% |
| 1bt9A00 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.60 | 54.0 | 4.05e-01 | 100.0% | 62.9% |
| 3sy9C01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.60 | 55.0 | 4.01e-01 | 100.0% | 51.0% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.60 | 47.0 | 4.50e-01 | 83.5% | 78.1% |
| 4rlcA00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.59 | 43.0 | 4.34e-01 | 82.7% | 74.1% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.58 | 46.0 | 4.51e-01 | 84.2% | 78.9% |
| 4fuvA00 | 2.40.160.170 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 49.0 | 4.20e-01 | 90.2% | 90.6% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.56 | 38.0 | 3.96e-01 | 72.9% | 75.4% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 47.0 | 4.19e-01 | 91.7% | 66.3% |
| 2rfrA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 39.0 | 3.74e-01 | 76.7% | 91.6% |
| 3gp6A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.53 | 40.0 | 3.88e-01 | 92.5% | 69.7% |
| 1idpA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 36.0 | 3.52e-01 | 70.7% | 98.6% |
| 2chcC00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 40.0 | 3.82e-01 | 82.0% | 98.1% |
| 5bkaE01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 36.0 | 3.68e-01 | 72.2% | 100.0% |
| 4l8oA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 36.0 | 3.45e-01 | 73.7% | 84.1% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4027955 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.63 | 54.0 | 3.97e-01 | 93.2% | 35.3% |
| 4591280 | 9.1.1.12 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › THAP4_heme-bd | 0.63 | 49.0 | 4.53e-01 | 88.7% | 64.1% |
| 3506845 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.63 | 53.0 | 4.36e-01 | 93.2% | 87.2% |
| 3936894 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.62 | 50.0 | 4.21e-01 | 86.5% | 81.3% |
| 3789884 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.62 | 51.0 | 4.27e-01 | 89.5% | 88.1% |
| 1734925 | 5084.5.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD | 0.61 | 55.0 | 3.90e-01 | 99.2% | 38.1% |
| 3508261 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.60 | 50.0 | 4.27e-01 | 91.7% | 86.2% |
| 3944979 | 5084.5.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 | 0.60 | 54.0 | 4.60e-01 | 100.0% | 78.6% |
| 3626832 | 883.1.1.15 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP+LBP_BPI_CETP_C | 0.57 | 48.0 | 3.46e-01 | 93.2% | 53.9% |
| 4956579 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.56 | 42.0 | 3.91e-01 | 78.2% | 84.2% |
| 3869259 | 213.1.1.22 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Hat1_N | 0.55 | 40.0 | 3.80e-01 | 75.2% | 85.2% |
| 3838829 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.54 | 46.0 | 4.15e-01 | 92.5% | 82.7% |
| 3840054 | 5084.1.1.15 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP | 0.54 | 44.0 | 4.38e-01 | 88.0% | 92.9% |
| 6402 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.53 | 41.0 | 3.83e-01 | 82.0% | 97.0% |
| 3276558 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.53 | 47.0 | 3.59e-01 | 97.0% | 94.4% |
| 6407 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.52 | 39.0 | 3.75e-01 | 78.2% | 90.2% |
D2
medium
residues 162-348
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3otlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.66 | 42.0 | 4.64e-01 | 89.8% | 78.4% |
| 3qszA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 42.0 | 4.38e-01 | 88.2% | 74.6% |
| 2yh6D00 | 3.30.530.50 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › | 0.59 | 31.0 | 3.94e-01 | 86.6% | 85.5% |
| 2d4rA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 38.0 | 4.19e-01 | 89.3% | 80.8% |
| 2q03A00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.57 | 35.0 | 4.03e-01 | 88.2% | 84.2% |
| 3p9vA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 38.0 | 4.07e-01 | 89.3% | 82.3% |
| 3zh5A00 | 2.40.128.710 | Mainly Beta › Beta Barrel › Lipocalin › Surface-adhesin protein E | 0.54 | 35.0 | 4.00e-01 | 86.1% | 89.4% |
| 2qrdA00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.54 | 30.0 | 3.74e-01 | 84.5% | 88.6% |
| 6oodA01 | 2.40.480.10 | Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like | 0.53 | 35.0 | 3.90e-01 | 88.2% | 83.8% |
| 3eniC00 | 2.50.10.10 | Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A | 0.52 | 42.0 | 3.34e-01 | 82.9% | 65.4% |
| 2zylA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.52 | 40.0 | 3.87e-01 | 89.8% | 69.6% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.51 | 38.0 | 4.10e-01 | 90.4% | 90.3% |
| 3jv1A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.51 | 37.0 | 3.76e-01 | 88.8% | 75.3% |
| 2jxpA01 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.51 | 34.0 | 3.85e-01 | 87.7% | 89.4% |
| 1qftB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 34.0 | 3.61e-01 | 86.1% | 74.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3646752 | 5084.5.1.23 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › TOC159_MAD | 0.68 | 42.0 | 3.61e-01 | 77.5% | 39.6% |
| 4241280 | 5084.8.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher | 0.61 | 40.0 | 3.02e-01 | 80.7% | 27.1% |
| 4254174 | 4099.1.1.22 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-P | 0.61 | 33.0 | 3.73e-01 | 75.4% | 67.6% |
| 3412367 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.59 | 45.0 | 4.58e-01 | 88.2% | 80.7% |
| 3959610 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.59 | 37.0 | 4.28e-01 | 89.3% | 87.2% |
| 4971555 | 9.13.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › DUF3224 | 0.59 | 39.0 | 4.38e-01 | 88.2% | 86.1% |
| 3507449 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.58 | 43.0 | 4.22e-01 | 89.3% | 69.8% |
| 4221575 | 4099.1.1.52 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › FTA2 | 0.55 | 28.0 | 3.59e-01 | 72.7% | 83.8% |
| 4940463 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.52 | 33.0 | 3.79e-01 | 89.8% | 85.9% |
| 3301111 | 331.3.1.25 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PaO | 0.51 | 35.0 | 4.02e-01 | 88.2% | 97.0% |
| 5079533 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.50 | 29.0 | 2.82e-01 | 89.3% | 47.9% |