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ERMGT119_2_scaffold_6_prodigal-single.1__X__X__00373

Bact-Vir

ERMGT119_2_scaffold_6_prodigal-single.1__X__X__00373

Identity

Kingdom:
phage

Quality

89.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 26-81
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yn3B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 33.0 3.03e-01 71.4% 45.1%
5o9iA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.54 40.0 2.95e-01 83.9% 72.5%
3sumB00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.54 37.0 2.82e-01 73.2% 53.7%
1iw4A00 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.54 35.0 3.53e-01 73.2% 67.3%
1xjaB00 2.60.120.280 Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC 0.53 35.0 2.62e-01 71.4% 24.0%
3jtnB00 3.30.70.1950 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 39.0 3.39e-01 82.1% 80.0%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
None — 0.65 45.0 3.40e-01 73.2% 68.1%
3802249 109.4.1.1291 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif 0.58 46.0 2.69e-01 91.1% 66.2%
3426138 109.4.1.1520 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase, E_motif 0.57 39.0 2.61e-01 73.2% 30.4%
3442726 109.4.1.1267 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.55 43.0 2.47e-01 92.9% 49.3%