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EU197055.1__ABY62894.1__201phi2-1p061__00060

Bact-Vir

EU197055.1__ABY62894.1__201phi2-1p061__00060

Identity

Accession:
EU197055 ↗
Kingdom:
phage

Quality

66.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 18-108
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fcgB00 2.60.40.3110 Mainly Beta › Sandwich › Immunoglobulin-like › Outer membrane usher protein 0.72 43.0 4.80e-01 93.4% 76.1%
1lvoA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 48.0 4.91e-01 95.6% 76.1%
1ti2B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 46.0 4.74e-01 95.6% 75.0%
5d1oA02 3.30.1490.70 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.65 46.0 5.00e-01 94.5% 90.4%
4ri0A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.64 46.0 3.53e-01 91.2% 33.8%
2gk6A02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.64 42.0 4.45e-01 83.5% 74.7%
4hd5A01 2.60.40.3760 Mainly Beta › Sandwich › Immunoglobulin-like › 0.62 47.0 4.62e-01 98.9% 77.3%
5lhrA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 44.0 4.10e-01 93.4% 59.8%
3vvvA00 2.60.40.2840 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 48.0 4.57e-01 98.9% 72.2%
1yd0A00 3.40.1440.10 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease 0.61 41.0 4.23e-01 85.7% 71.9%
2bhgA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.60 46.0 4.62e-01 92.3% 78.3%
2j73A00 2.60.40.1110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 46.0 4.51e-01 100.0% 75.7%
2f91A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 43.0 4.04e-01 93.4% 63.7%
1lktA00 2.170.14.10 Mainly Beta › Beta Complex › Tailspike Protein; Chain › Phage P22 tailspike-like, N-terminal domain 0.57 51.0 4.89e-01 96.7% 87.5%
4ry2A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 38.0 3.32e-01 84.6% 44.7%
7cymA03 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.56 40.0 4.08e-01 96.7% 78.2%
5c86A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 50.0 4.88e-01 100.0% 94.1%
4kc7A02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.56 43.0 4.21e-01 83.5% 100.0%
5fmvA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 47.0 4.88e-01 96.7% 98.8%
1yq2A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 48.0 4.45e-01 94.5% 92.2%
3oqgA00 3.40.1440.50 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › 0.55 42.0 3.42e-01 84.6% 42.6%
2je8A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 49.0 4.58e-01 96.7% 97.3%
2a74A05 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.55 43.0 4.16e-01 98.9% 75.2%
5yjlD01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 49.0 4.22e-01 100.0% 73.2%
7sf2A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 49.0 4.87e-01 98.9% 100.0%
3tp4B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 48.0 4.83e-01 96.7% 97.8%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 38.0 4.22e-01 83.5% 94.3%
3b2dC00 2.60.40.770 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 48.0 4.14e-01 96.7% 63.3%
2q18X02 3.90.850.10 Alpha Beta › Alpha-Beta Complex › Fumarylacetoacetate hydrolase; domain 2 › Fumarylacetoacetase-like, C-terminal domain 0.54 47.0 3.61e-01 96.7% 46.7%
3o4lD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 45.0 4.38e-01 97.8% 83.7%
3hvnA01 3.90.840.10 Alpha Beta › Alpha-Beta Complex › HIV-1 Reverse Transcriptase; Chain A, domain 3 › Thiol-activated cytolysin superfamily/Thiol-activated cytolysin, alpha-beta domain 0.54 47.0 3.89e-01 100.0% 73.3%
2e56A00 2.60.40.770 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 47.0 4.01e-01 96.7% 76.4%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.53 37.0 3.33e-01 84.6% 51.1%
2pn5A05 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.53 46.0 4.52e-01 95.6% 92.7%
5jtwA05 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.53 46.0 4.23e-01 96.7% 73.6%
2q3xA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 47.0 4.06e-01 100.0% 77.5%
2bv4A00 2.60.120.400 Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin 0.52 45.0 4.20e-01 94.5% 82.3%
4fxtA02 2.60.40.2060 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 45.0 4.33e-01 98.9% 94.4%
3votB02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.52 46.0 3.26e-01 100.0% 43.7%
1w15A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 47.0 4.12e-01 98.9% 91.7%
3cu7A05 2.60.40.1930 Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain 0.52 46.0 4.38e-01 97.8% 92.5%
5bviA00 2.60.200.10 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.51 38.0 3.03e-01 79.1% 91.2%
2x8fA02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.51 43.0 4.29e-01 95.6% 90.5%
4jfhE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 44.0 4.06e-01 94.5% 95.7%
3nqhA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 44.0 3.87e-01 96.7% 92.6%
2d9wA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 38.0 3.64e-01 83.5% 92.7%
2vsdA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 43.0 4.29e-01 96.7% 96.8%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1099000 1.1.5.19 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C30 0.68 48.0 3.80e-01 96.7% 36.2%
4852372 1.1.5.19 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C30 0.67 48.0 3.71e-01 95.6% 35.1%
3420143 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.67 51.0 4.19e-01 91.2% 45.6%
4955308 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 47.0 4.94e-01 96.7% 82.5%
5032095 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 49.0 4.99e-01 96.7% 78.9%
4032846 1.1.4.1 beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C 0.66 49.0 4.64e-01 79.1% 71.8%
3428386 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.66 51.0 3.69e-01 93.4% 30.0%
3443528 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.65 49.0 3.69e-01 91.2% 33.5%
3290861 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.63 53.0 4.72e-01 100.0% 64.6%
3428387 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.62 48.0 3.82e-01 93.4% 41.1%
5023115 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.62 40.0 4.60e-01 92.3% 92.3%
4928971 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.60 50.0 4.70e-01 100.0% 76.4%
3897274 284.1.1.12 a+b two layers › FKBP-like › FKBP-like › FKBP-like › TR61B_FKBP-like 0.59 42.0 4.69e-01 80.2% 95.7%
3425181 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.59 50.0 3.67e-01 91.2% 36.5%
5023642 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 45.0 4.58e-01 94.5% 84.4%
4526294 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 27.0 3.09e-01 94.5% 56.9%
4911687 1.1.5.19 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_C30 0.57 47.0 3.94e-01 100.0% 51.6%
4095963 192.8.1.446 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › SKICH 0.57 51.0 3.57e-01 97.8% 36.4%
2032855 9.28.1.1 beta barrels › Lipocalins/Streptavidin › Barrel domain in extracellular arabinanase › Barrel domain in extracellular arabinanase › GH43_C 0.57 44.0 4.30e-01 83.5% 97.0%
3590397 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.57 51.0 5.08e-01 98.9% 95.8%
3229859 1.1.17.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.57 48.0 3.52e-01 94.5% 38.4%
5029613 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 50.0 4.82e-01 94.5% 94.0%
3229867 1.1.17.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.57 47.0 3.44e-01 92.3% 44.8%
5054718 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 4.96e-01 96.7% 100.0%
4927113 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 45.0 4.46e-01 84.6% 91.6%
4680896 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 45.0 4.57e-01 97.8% 86.7%
392939 11.1.1.37 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 0.56 49.0 4.28e-01 96.7% 63.6%
3725629 11.1.1.14 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_2 0.56 48.0 4.58e-01 95.6% 98.2%
4015869 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 48.0 4.69e-01 93.4% 98.0%
4982354 4.7.1.0 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.56 37.0 4.21e-01 80.2% 95.4%
3547199 11.1.1.179 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.56 48.0 4.37e-01 96.7% 86.4%
3810292 3792.1.1.2 beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › APC1_3rd 0.56 38.0 4.16e-01 94.5% 85.3%
4979291 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.55 38.0 4.18e-01 84.6% 88.0%
4959363 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 47.0 4.60e-01 94.5% 92.0%
3525544 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 48.0 4.89e-01 96.7% 100.0%
5051246 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 48.0 4.69e-01 96.7% 98.0%
5062206 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 48.0 4.68e-01 96.7% 95.0%
145279 11.1.1.37 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 0.55 48.0 4.15e-01 96.7% 78.4%
5010852 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 48.0 4.68e-01 97.8% 99.0%
3278175 206.1.3.97 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_4, LAL_C2 0.54 50.0 3.41e-01 100.0% 44.7%
4937921 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 47.0 4.49e-01 94.5% 94.3%
5009284 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 47.0 4.46e-01 98.9% 93.6%
164761 11.1.1.37 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 0.53 47.0 4.01e-01 96.7% 76.4%
1735187 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 47.0 4.09e-01 96.7% 80.3%
5049718 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 46.0 4.33e-01 98.9% 92.2%
3485798 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 46.0 3.91e-01 96.7% 92.7%
3896466 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 46.0 4.07e-01 97.8% 86.7%
5023116 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 46.0 4.54e-01 95.6% 94.7%
3922466 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 45.0 3.94e-01 96.7% 63.6%
5024227 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 34.0 3.85e-01 82.4% 96.8%
5035244 11.1.1.284 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 0.51 44.0 4.40e-01 95.6% 96.8%
3642325 9.1.1.29 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › BFA1_C 0.51 44.0 3.77e-01 100.0% 81.0%
3808424 11.1.4.55 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Self-incomp_S1 0.50 41.0 3.83e-01 93.4% 70.4%