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EU197055.1__ABY62986.1__201phi2-1p156__00154

Bact-Vir

EU197055.1__ABY62986.1__201phi2-1p156__00154

Identity

Accession:
EU197055 ↗
Kingdom:
phage

Quality

79.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Serwervirus› Pseudomonas_phage_201phi2-1

TaxID: 198110

Cluster

View cluster (9 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 25-111
PDB
D2 high residues 132-151_164-385
PDB
Domain cluster: rep: MK552327.1__QBJ02747.1__PSA21_221__00221__D124-386
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12699.14 best phiKZ_IP 144.0 1.10e-41 97.9% 67.1%
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2oexA01 1.20.120.560 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › alix/aip1 in complex with the ypdl late domain 0.68 34.0 4.38e-01 99.6% 81.1%
5figA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.67 22.0 3.54e-01 100.0% 73.0%
5j1gA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 38.0 3.93e-01 70.7% 57.9%
5nl6B01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 34.0 4.75e-01 74.0% 100.0%
1qsdA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 28.0 4.32e-01 76.4% 99.0%
3vprA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.63 31.0 3.97e-01 71.9% 77.2%
1y4cA03 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.61 30.0 4.28e-01 77.7% 100.0%
2qqyA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.60 28.0 3.65e-01 89.3% 75.4%
1w99A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.60 36.0 4.15e-01 80.6% 80.3%
2l10A00 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.60 32.0 3.94e-01 76.9% 79.7%
6xkyA01 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.59 41.0 4.65e-01 91.7% 90.9%
1a7eA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.58 27.0 3.71e-01 74.8% 86.4%
1jmwA00 1.20.120.30 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain 0.58 35.0 4.42e-01 82.2% 97.9%
4d8mA01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.57 37.0 3.90e-01 84.7% 71.8%
2c41C01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.57 28.0 3.51e-01 89.3% 75.2%
2oduA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 26.0 3.89e-01 75.2% 99.0%
2nsfA01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.56 32.0 3.80e-01 93.8% 81.8%
4yjwA00 1.20.120.930 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF12889, N-terminal DUF3829 0.56 36.0 4.37e-01 82.6% 100.0%
6iknD01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.56 34.0 3.29e-01 92.6% 53.9%
6grjB01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.55 41.0 3.82e-01 76.4% 91.7%
1dowA00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.54 33.0 3.60e-01 81.8% 69.8%
3zciA00 1.20.58.1660 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 40.0 4.50e-01 76.0% 95.3%
4cybD00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.54 29.0 3.36e-01 83.1% 70.2%
1o5hA00 1.20.120.680 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Formiminotetrahydrofolate cyclodeaminase monomer, up-and-down helical bundle 0.54 34.0 3.67e-01 83.1% 74.0%
2kbbA00 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.54 32.0 3.71e-01 86.8% 80.5%
1zs3A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.53 27.0 3.23e-01 73.1% 67.8%
4o6yB00 1.20.120.1770 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.51 32.0 3.48e-01 85.5% 72.0%
1sj8A02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.50 25.0 3.53e-01 91.3% 95.1%
4k1pE00 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.50 43.0 3.89e-01 89.7% 88.9%
1y1uA01 1.20.1050.20 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › STAT transcription factor, all-alpha domain 0.50 38.0 4.21e-01 83.5% 97.4%
7dl9A01 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.50 26.0 2.89e-01 73.1% 59.8%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3255242 601.1.2.4 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Talin_R4 0.76 29.0 3.53e-01 99.2% 52.5%
5054541 2004.1.1.87 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N 0.73 35.0 2.62e-01 92.6% 19.5%
3197870 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.69 39.0 5.14e-01 71.9% 97.8%
3402327 3755.3.1.324 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF725 0.69 35.0 4.23e-01 93.8% 71.2%
4471073 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.67 35.0 2.99e-01 92.1% 32.4%
3872220 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.67 32.0 4.69e-01 77.7% 99.1%
3235839 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.67 34.0 4.03e-01 92.1% 68.0%
3691581 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.66 37.0 4.90e-01 72.7% 98.5%
3896730 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.65 36.0 4.82e-01 72.3% 97.8%
3801787 604.5.1.39 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PF26581 0.64 37.0 4.81e-01 70.2% 99.3%
3940794 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.64 32.0 4.51e-01 71.5% 95.8%
3877415 604.1.1.118 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › GOSR1_N 0.64 39.0 4.70e-01 71.5% 90.0%
3552989 604.8.1.1 ↗ alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo › Smac_DIABLO 0.63 41.0 4.70e-01 71.5% 85.9%
4387572 603.1.1.201 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › AflR 0.63 41.0 4.61e-01 82.2% 85.6%
3447988 603.1.1.102 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF3537 0.62 47.0 5.19e-01 82.6% 96.9%
3781234 1065.1.1.0 ↗ alpha bundles › SPX domain › SPX domain › SPX domain 0.61 46.0 4.94e-01 77.3% 90.2%
3693258 604.7.1.1 ↗ alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA 0.61 28.0 4.12e-01 74.4% 95.5%
4022048 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.60 42.0 4.86e-01 75.6% 96.6%
3386714 601.51.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin › Flagellin_N 0.60 44.0 4.35e-01 93.8% 71.5%
3726416 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.60 42.0 4.18e-01 73.6% 67.1%
4016984 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.59 46.0 3.78e-01 80.6% 54.6%
3335074 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.59 32.0 4.39e-01 88.0% 100.0%
3368549 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.59 44.0 4.58e-01 100.0% 82.3%
3688613 1065.1.1.0 ↗ alpha bundles › SPX domain › SPX domain › SPX domain 0.59 42.0 4.58e-01 71.5% 94.4%
3601314 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.59 42.0 3.66e-01 72.3% 66.1%
3969040 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.58 38.0 3.76e-01 86.0% 61.6%
3283147 310.2.1.0 ↗ a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.58 38.0 3.73e-01 83.1% 59.2%
2722116 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.58 46.0 5.06e-01 91.3% 100.0%
3734369 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.57 40.0 3.76e-01 77.7% 56.1%
3193298 4121.1.1.0 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like 0.57 45.0 3.60e-01 81.8% 49.2%
2320846 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.57 45.0 4.95e-01 89.3% 100.0%
3227429 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.57 49.0 4.47e-01 90.9% 82.5%
3965792 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.56 29.0 2.85e-01 93.4% 42.2%
3482628 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 29.0 2.72e-01 72.3% 38.3%
3856927 633.23.1.34 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › CD20 0.55 39.0 4.49e-01 88.8% 98.9%
3703485 4177.1.1.34 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Flagellar_rod 0.55 42.0 3.88e-01 78.9% 81.2%
3969668 3758.2.1.1 ↗ alpha bundles › Bacterial hemolysins-like › Biopolymer transport protein ExbB › Biopolymer transport protein ExbB › MotA_ExbB 0.55 40.0 4.09e-01 73.1% 89.6%
2722819 3758.2.1.1 ↗ alpha bundles › Bacterial hemolysins-like › Biopolymer transport protein ExbB › Biopolymer transport protein ExbB › MotA_ExbB 0.55 40.0 4.09e-01 74.4% 85.2%
3179413 4121.1.1.1 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.54 39.0 3.53e-01 73.1% 68.2%
3491897 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.54 37.0 4.21e-01 91.7% 89.7%
5007124 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.54 38.0 3.56e-01 91.7% 60.0%
3627320 109.4.1.1329 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NatB_MDM20, PF31234 0.53 48.0 3.19e-01 95.9% 45.2%
3251839 601.1.2.4 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Talin_R4 0.53 30.0 4.00e-01 72.3% 100.0%
3394755 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.53 45.0 4.59e-01 91.7% 90.8%
3603733 4121.1.1.19 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › PF27230 0.52 40.0 3.66e-01 78.9% 65.6%
3270091 601.19.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein 0.52 36.0 3.96e-01 99.6% 83.4%
3243410 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.52 34.0 4.09e-01 87.6% 100.0%
3543833 3758.1.1.57 ↗ alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › Prominin 0.51 44.0 4.11e-01 91.7% 82.3%
4467663 601.51.1.2 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin › Flagellin_N,Flagellin_C 0.51 43.0 4.11e-01 92.6% 75.7%
None — 0.51 43.0 3.94e-01 89.7% 77.1%
3273799 604.5.1.0 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.51 40.0 4.02e-01 82.2% 100.0%
3503307 1203.1.2.1 ↗ alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › ASD2 0.50 30.0 3.62e-01 75.6% 88.1%