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EU197055.1__ABY63072.1__201phi2-1p244__00241

Bact-Vir

EU197055.1__ABY63072.1__201phi2-1p244__00241

Identity

Accession:
EU197055 ↗
Kingdom:
phage

Quality

90.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Serwervirus› Pseudomonas_phage_201phi2-1

TaxID: 198110

Cluster

View cluster (47 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-75
PDB
Domain cluster: rep: LC765218.1__BEG72430.1__RVBP21_0580__00058__D8-75
D2 high residues 79-158
PDB
Domain cluster: representative
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 42.0 4.50e-01 83.7% 83.3%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 39.0 4.29e-01 80.0% 85.7%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 38.0 4.15e-01 80.0% 87.1%
1uzxA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.58 40.0 3.33e-01 86.3% 40.7%
4bq2D01 2.60.120.430 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin 0.58 47.0 3.55e-01 87.5% 92.6%
1lv9A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 33.0 3.65e-01 100.0% 70.3%
2hdlA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 36.0 3.68e-01 93.8% 64.9%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.57 32.0 3.87e-01 71.2% 91.7%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 37.0 4.05e-01 83.7% 85.7%
1zj8A04 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.56 41.0 3.40e-01 77.5% 60.8%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 35.0 3.28e-01 77.5% 50.0%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 39.0 3.43e-01 77.5% 78.3%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.53 33.0 3.68e-01 72.5% 89.3%
6kjuB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 42.0 3.74e-01 88.7% 89.7%
1h7zA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.52 41.0 3.19e-01 87.5% 81.2%
3a9gA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.52 43.0 2.89e-01 93.8% 97.9%
5mghA01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.52 44.0 3.07e-01 98.8% 73.6%
7arcC01 3.30.460.80 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › NADH:ubiquinone oxidoreductase Nqo5 subunit 0.52 45.0 3.87e-01 100.0% 69.6%
3k4zA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 42.0 3.36e-01 88.7% 93.8%
1eurA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.51 36.0 2.47e-01 77.5% 27.7%
4mb4A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 39.0 3.98e-01 100.0% 86.1%
4hstB02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.50 33.0 3.49e-01 98.8% 77.9%
1b7yA00 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.50 41.0 3.01e-01 97.5% 79.2%
3qcmA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.50 40.0 2.79e-01 100.0% 24.8%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3647962 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.64 39.0 3.26e-01 72.5% 33.8%
3670792 243.3.1.67 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Phytochelatin_C 0.63 43.0 4.70e-01 72.5% 95.4%
3625971 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.62 39.0 3.27e-01 72.5% 35.2%
4997648 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.60 34.0 4.00e-01 70.0% 86.0%
5054433 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 35.0 4.00e-01 70.0% 88.0%
3221229 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 33.0 4.11e-01 70.0% 95.6%
3608236 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.59 39.0 4.26e-01 83.7% 84.6%
4041586 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.59 39.0 4.20e-01 83.7% 84.6%
3265170 4.1.1.57 ↗ beta barrels › SH3 › SH3 › SH3 › EFP_N 0.58 39.0 4.14e-01 83.7% 84.6%
3969155 283.2.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.58 50.0 4.11e-01 100.0% 77.4%
5079755 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.58 34.0 3.83e-01 72.5% 81.8%
4990926 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.57 34.0 3.86e-01 72.5% 90.0%
4993562 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 42.0 3.90e-01 78.8% 61.9%
4145191 2003.1.5.53 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › tRNA_U5-meth_tr 0.57 39.0 2.53e-01 71.2% 34.7%
4015269 523.1.1.0 ↗ a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain 0.57 51.0 4.77e-01 100.0% 88.8%
4364336 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.56 35.0 4.14e-01 71.2% 92.7%
3826506 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 40.0 2.77e-01 76.2% 30.5%
5050697 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.55 33.0 3.80e-01 72.5% 92.0%
3195479 316.1.1.10 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Nrap 0.55 48.0 3.41e-01 100.0% 65.7%
4945816 375.1.1.333 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › jr-ZPR1 0.55 35.0 3.93e-01 73.8% 92.7%
5044597 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.55 32.0 3.68e-01 70.0% 90.0%
3942832 7577.1.1.11 ↗ a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › SelA 0.54 47.0 3.03e-01 95.0% 91.0%
4344658 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.54 43.0 2.75e-01 88.7% 25.4%
4013260 327.5.1.5 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C_3 0.53 41.0 2.80e-01 87.5% 35.3%
418498 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.53 40.0 3.21e-01 86.3% 41.0%
3913149 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.53 39.0 3.23e-01 83.7% 42.7%
3818311 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.52 41.0 3.27e-01 87.5% 41.9%
4024164 314.1.1.3 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d 0.52 45.0 3.23e-01 98.8% 77.3%
3181024 719.1.1.2 ↗ beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.52 39.0 3.38e-01 80.0% 95.4%
3490141 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.52 38.0 3.20e-01 86.3% 43.4%
4258446 314.1.1.0 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.52 44.0 2.95e-01 97.5% 57.4%
4318793 2003.1.5.196 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM5-TYW2_MTfase, tRNA_U5-meth_tr 0.52 40.0 2.63e-01 86.3% 93.3%
3676745 2484.1.1.157 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.52 35.0 2.96e-01 98.8% 40.0%
3968741 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.52 40.0 3.31e-01 87.5% 68.1%
3347601 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.52 39.0 3.18e-01 87.5% 41.9%
4813080 5.1.3.32 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_4 0.51 38.0 2.74e-01 81.2% 33.3%
4984581 283.1.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase 0.51 44.0 3.55e-01 100.0% 58.8%
4109595 314.1.1.3 ↗ a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d 0.51 43.0 3.10e-01 96.2% 71.5%