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EU399241.1__ABY90404.1__HAPgp36__00036

Bact-Vir

EU399241.1__ABY90404.1__HAPgp36__00036

Identity

Accession:
EU399241 ↗
Kingdom:
phage

Quality

83.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 29-166
PDB
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.57 26.0 3.52e-01 84.8% 83.1%
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 32.0 3.91e-01 72.5% 89.3%
4ztkA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.56 40.0 3.20e-01 71.7% 97.8%
3nqnA00 3.30.530.70 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › Uncharacterised protein PF12723, DUF3809 0.55 42.0 4.14e-01 81.2% 94.7%
4xrtA02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 40.0 3.89e-01 81.2% 91.9%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.52 31.0 3.62e-01 73.9% 86.0%
3d9wA02 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.52 36.0 4.12e-01 79.7% 97.1%
1c8zA00 3.20.90.10 Alpha Beta › Alpha-Beta Barrel › Tubby Protein; Chain A › Tubby Protein; Chain A 0.51 38.0 3.16e-01 80.4% 85.3%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.50 30.0 3.02e-01 71.0% 57.7%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4929364 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.70 31.0 4.47e-01 79.7% 89.2%
7904 247.1.1.11 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.58 43.0 3.47e-01 79.0% 86.4%
4927783 218.1.1.2 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N 0.57 29.0 3.08e-01 77.5% 54.2%
None 0.55 36.0 2.56e-01 75.4% 20.5%
4027513 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.55 33.0 3.60e-01 76.1% 71.3%
3412288 298.1.1.6 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › G6PD_C 0.55 45.0 3.57e-01 92.0% 84.8%
3937269 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.54 36.0 3.26e-01 73.9% 48.6%
4943345 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 35.0 4.02e-01 79.0% 90.0%
3738504 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.53 34.0 3.76e-01 77.5% 81.8%
4967085 247.1.1.11 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 0.52 39.0 3.22e-01 77.5% 87.7%
3305631 375.1.1.184 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_TOP3B 0.52 28.0 3.57e-01 72.5% 92.0%
3961452 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.51 33.0 3.68e-01 90.6% 85.7%
D2 high residues 514-710
PDB
CATH (67)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fwrA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.79 61.0 6.45e-01 91.9% 88.2%
6l5oA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 66.0 6.55e-01 87.3% 92.6%
2z0mA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 66.0 6.77e-01 87.8% 91.1%
3i5xA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 72.0 6.58e-01 96.4% 98.8%
8tbxA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 66.0 6.26e-01 87.8% 86.7%
5supC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 66.0 6.44e-01 88.3% 89.2%
3rc3A03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 57.0 6.29e-01 81.2% 92.5%
7nadx01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 66.0 6.45e-01 89.3% 94.8%
2zpaA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 48.0 5.78e-01 81.2% 91.9%
5dcaA09 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 64.0 6.31e-01 88.3% 90.5%
1c4oA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 54.0 6.18e-01 89.8% 94.1%
6s8oB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 64.0 6.28e-01 88.3% 93.4%
2pl3A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 68.0 6.37e-01 93.4% 91.4%
4ljyA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 69.0 6.18e-01 95.4% 86.5%
1rifA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 62.0 6.33e-01 87.3% 87.5%
8alzB05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 64.0 6.36e-01 89.3% 92.2%
3dkpA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 68.0 6.33e-01 95.9% 93.8%
7clgB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 56.0 6.30e-01 86.3% 98.7%
2vl7A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 62.0 6.64e-01 91.9% 100.0%
6yhrA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 61.0 6.22e-01 86.3% 92.3%
3v4rA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 64.0 5.91e-01 90.9% 95.1%
2v1xA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 67.0 6.41e-01 95.4% 99.5%
1a1vA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 50.0 5.97e-01 72.1% 100.0%
4w7sA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 67.0 5.97e-01 95.9% 89.6%
7w0bA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 62.0 6.04e-01 87.3% 95.2%
3crvA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.73 64.0 5.86e-01 91.9% 98.4%
8ebtA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 62.0 6.55e-01 91.9% 98.3%
6znpA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 63.0 6.18e-01 91.4% 100.0%
2kbeA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 61.0 5.84e-01 88.3% 82.7%
5gvrA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 68.0 6.33e-01 98.5% 99.1%
6b4kB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 56.0 6.01e-01 80.2% 92.4%
2p6nA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 54.0 5.95e-01 79.7% 95.0%
2hyiC02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 54.0 5.85e-01 80.2% 92.8%
4nl4H03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 62.0 6.22e-01 91.9% 91.8%
1hv8A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 53.0 5.97e-01 79.2% 100.0%
7pliF02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 53.0 5.97e-01 79.2% 100.0%
1gkuB03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.70 50.0 5.28e-01 79.2% 80.6%
6vsxA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 52.0 5.76e-01 94.4% 95.6%
7r7jA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 60.0 6.23e-01 91.9% 97.3%
3dmnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 51.0 5.61e-01 94.9% 93.8%
6jdrA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 46.0 5.36e-01 96.4% 95.8%
6jytA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 53.0 5.76e-01 84.3% 97.6%
7nadx02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 52.0 4.86e-01 81.2% 90.3%
3nbxX01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 47.0 4.68e-01 87.8% 70.8%
1jqlB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 44.0 5.14e-01 95.9% 100.0%
6j19A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 55.0 4.98e-01 92.9% 90.0%
3e1sA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 54.0 5.26e-01 97.0% 83.5%
3vkgA05 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 46.0 5.18e-01 87.3% 100.0%
8jx6B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 54.0 5.46e-01 92.4% 96.0%
8bnsD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.62 53.0 5.48e-01 93.4% 95.1%
3jzmA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 51.0 4.68e-01 86.8% 71.0%
8db3B02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 49.0 4.87e-01 86.8% 79.8%
1zxxA02 3.40.50.460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphofructokinase domain 0.60 36.0 4.36e-01 90.9% 90.4%
4wiaC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 50.0 4.75e-01 86.3% 77.0%
1szpB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 50.0 4.90e-01 86.8% 82.5%
6k6wC01 3.40.50.10710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Metallo-hydrolase/oxidoreductase 0.59 44.0 4.92e-01 83.8% 100.0%
1z6tA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 46.0 4.86e-01 87.8% 89.3%
3d3qA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 38.0 4.25e-01 96.4% 81.8%
3e15A00 3.40.50.1360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 53.0 4.70e-01 98.5% 92.8%
2r6fA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.58 45.0 4.61e-01 91.9% 83.1%
2ekdA00 3.40.50.11570 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF257 0.58 47.0 4.71e-01 85.8% 89.6%
2a5yC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 45.0 4.65e-01 86.8% 87.9%
6mjgA01 3.40.1010.10 Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain 0.56 35.0 4.27e-01 95.9% 98.3%
3h7aA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 41.0 4.03e-01 76.1% 94.3%
1qhxA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 34.0 3.63e-01 82.2% 68.5%
3efoB04 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.53 40.0 3.77e-01 77.7% 88.2%
3rf7A01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 44.0 4.55e-01 98.0% 92.1%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5049581 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.81 69.0 5.87e-01 88.3% 96.3%
4012061 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 68.0 5.90e-01 88.3% 82.5%
None 0.80 68.0 6.53e-01 88.3% 88.6%
None 0.79 57.0 5.34e-01 81.2% 61.7%
4030842 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.79 67.0 6.86e-01 88.3% 95.3%
4029351 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.78 68.0 6.23e-01 90.4% 91.6%
3714023 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.78 74.0 6.36e-01 100.0% 94.6%
3705303 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.78 74.0 5.29e-01 100.0% 54.8%
None 0.78 66.0 5.04e-01 87.3% 98.0%
419052 2004.1.1.232 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEXQc_Suv3 0.78 57.0 6.13e-01 81.2% 86.0%
5014580 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.78 61.0 6.28e-01 88.3% 84.2%
4223106 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.77 70.0 6.13e-01 93.9% 96.4%
3725350 2004.1.1.232 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEXQc_Suv3 0.77 56.0 4.64e-01 80.7% 44.6%
3971478 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.77 66.0 5.80e-01 88.3% 90.2%
4887412 2004.1.1.489 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII, PF27431 0.77 66.0 5.40e-01 88.3% 96.4%
3990336 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 57.0 4.95e-01 80.7% 52.5%
4560525 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.77 68.0 6.34e-01 91.9% 95.4%
3221893 2004.1.1.232 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEXQc_Suv3 0.77 57.0 5.52e-01 81.2% 68.8%
4996029 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.77 65.0 5.32e-01 87.8% 52.6%
3211954 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.77 65.0 6.47e-01 88.3% 88.8%
4955144 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.77 65.0 5.83e-01 88.3% 78.1%
4019283 2004.1.1.880 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C, DEXQc_Suv3 0.77 56.0 4.29e-01 81.2% 35.6%
3624408 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.77 71.0 6.49e-01 96.4% 93.9%
4026028 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.76 71.0 6.35e-01 98.0% 89.1%
3588069 2004.1.1.485 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD, DEAD_2 0.76 65.0 5.87e-01 88.3% 95.7%
4215893 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.76 72.0 5.96e-01 99.5% 100.0%
4966137 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.76 67.0 6.29e-01 92.9% 94.0%
3988221 2004.1.1.554 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_inter 0.76 63.0 5.01e-01 86.3% 99.5%
3434811 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.75 67.0 5.95e-01 92.9% 82.2%
4178835 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.75 70.0 6.59e-01 98.5% 98.7%
4953117 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.75 62.0 6.59e-01 91.9% 96.0%
None 0.75 67.0 6.35e-01 92.9% 99.1%
4971067 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 64.0 5.78e-01 88.3% 95.7%
5058934 2004.1.1.1221 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27431 0.75 65.0 5.45e-01 90.9% 96.2%
3977708 2004.1.1.485 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD, DEAD_2 0.75 64.0 5.54e-01 88.3% 92.6%
3597207 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.75 66.0 5.00e-01 92.4% 51.4%
5001121 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.75 64.0 5.81e-01 88.3% 94.0%
3604555 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.75 66.0 6.13e-01 92.4% 92.5%
3164468 2004.1.1.194 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_2 0.75 65.0 4.73e-01 90.4% 56.5%
4940101 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.74 66.0 6.36e-01 92.9% 97.3%
3350622 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.74 67.0 6.11e-01 93.9% 92.0%
5078829 2004.1.1.233 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cas3-like_C_2 0.74 63.0 4.74e-01 87.3% 45.1%
4832330 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.74 53.0 5.85e-01 72.1% 100.0%
3904197 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 69.0 5.51e-01 98.0% 63.3%
4880621 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.74 63.0 6.14e-01 88.3% 88.2%
None 0.74 70.0 5.42e-01 100.0% 51.9%
3837863 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.74 66.0 4.36e-01 93.4% 30.8%
3743706 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.74 65.0 5.50e-01 91.4% 74.1%
3586486 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.74 70.0 5.33e-01 100.0% 49.2%
3169509 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.74 67.0 6.30e-01 94.9% 95.7%
3647659 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.74 64.0 6.39e-01 89.8% 91.5%
4996175 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.74 65.0 5.59e-01 92.9% 72.7%
3362277 2004.1.1.304 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD,Helicase_C,RecQ_Zn_bind 0.74 68.0 5.04e-01 97.5% 48.3%
3679387 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.73 65.0 4.74e-01 93.9% 44.4%
3612550 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.73 68.0 6.28e-01 98.0% 92.7%
5011954 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.73 64.0 5.87e-01 90.9% 97.6%
3715440 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.73 63.0 4.61e-01 90.4% 36.3%
3594130 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 69.0 6.27e-01 99.0% 91.6%
4020072 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.73 68.0 4.94e-01 98.0% 57.8%
3489612 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.73 68.0 5.93e-01 99.5% 87.6%
3605157 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.73 62.0 6.01e-01 88.3% 85.6%
3611253 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.72 62.0 5.77e-01 88.3% 74.0%
3190243 2004.1.1.232 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEXQc_Suv3 0.72 57.0 5.21e-01 81.2% 67.2%
3937474 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.72 68.0 6.45e-01 100.0% 99.6%
3482580 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 68.0 5.76e-01 100.0% 82.3%
3620596 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.72 68.0 5.87e-01 100.0% 96.6%
5001639 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 63.0 6.02e-01 91.9% 96.0%
5067389 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.71 64.0 5.58e-01 93.9% 99.6%
3404309 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 67.0 4.66e-01 99.5% 41.2%
5026034 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.71 53.0 5.99e-01 79.7% 98.1%
3877172 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.71 55.0 5.48e-01 80.7% 77.5%
4114330 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.70 55.0 5.85e-01 80.2% 90.9%
4534097 2004.1.1.29 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.70 59.0 4.28e-01 87.8% 39.6%
3089043 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.70 60.0 6.18e-01 91.9% 93.1%
5008809 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 59.0 4.30e-01 88.3% 40.2%
3644267 2004.1.1.304 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD,Helicase_C,RecQ_Zn_bind 0.70 66.0 4.78e-01 100.0% 48.5%
3989299 2004.1.1.120 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII 0.70 61.0 4.68e-01 91.9% 45.6%
3261127 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.70 66.0 5.06e-01 100.0% 55.9%
4003840 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.69 54.0 5.38e-01 81.2% 90.2%
5067491 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.69 60.0 6.11e-01 91.9% 98.9%
3986744 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.68 58.0 4.94e-01 87.8% 97.3%
5039939 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.68 54.0 5.70e-01 81.2% 95.4%
5010622 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.68 53.0 5.47e-01 81.2% 96.8%
3581013 2004.1.1.364 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C 0.67 61.0 4.53e-01 95.9% 44.3%
4971857 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.66 50.0 4.97e-01 77.7% 83.4%
4981830 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.65 53.0 5.24e-01 86.8% 80.0%
3586943 2004.1.1.68 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IstB_IS21 0.63 53.0 5.23e-01 92.4% 83.4%
5057343 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.63 52.0 4.96e-01 86.8% 77.0%
5003746 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.62 52.0 4.93e-01 86.8% 77.8%
4962866 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.62 52.0 4.97e-01 86.8% 79.1%
3718866 2004.1.1.135 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 0.61 53.0 5.15e-01 92.4% 81.8%
None 0.61 53.0 5.17e-01 90.9% 84.2%
135757 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.61 51.0 4.58e-01 86.8% 66.7%
5078123 2004.1.1.791 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GvpD_bR2 0.60 52.0 4.76e-01 90.9% 85.8%
5069140 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.58 49.0 5.14e-01 93.4% 97.2%
4955903 2004.1.1.196 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 0.57 48.0 4.90e-01 89.8% 95.9%
3587801 2004.1.1.554 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_inter 0.57 47.0 3.80e-01 87.8% 98.9%
3673255 2004.1.1.1 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.56 46.0 4.75e-01 91.4% 91.9%
5030397 2004.1.1.144 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 0.55 50.0 4.51e-01 97.0% 83.8%
D3 medium residues 167-281
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1q57G01 2.20.25.180 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.74 47.0 5.64e-01 90.4% 100.0%
1ei5A03 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.61 45.0 4.82e-01 86.1% 88.2%
1gkaB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 49.0 4.28e-01 93.9% 61.5%
4edgA01 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.57 46.0 4.42e-01 87.0% 97.0%
4u3qB00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.56 38.0 4.14e-01 78.3% 81.8%
1eqnB01 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.55 46.0 4.48e-01 89.6% 100.0%
2au3A02 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.55 46.0 4.46e-01 89.6% 99.2%
5w36B01 3.90.980.10 Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain 0.54 45.0 4.29e-01 89.6% 98.5%
2gu1A01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 32.0 3.58e-01 82.6% 80.7%
4esqA00 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.51 38.0 3.25e-01 78.3% 93.3%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4111345 4023.1.1.0 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core 0.80 51.0 6.25e-01 89.6% 98.7%
3511263 4023.1.1.0 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core 0.73 50.0 5.49e-01 92.2% 84.2%
6450 4023.1.1.2 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › Helic-prim_T7_N 0.71 45.0 5.46e-01 90.4% 100.0%
4537309 4023.1.1.0 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core 0.62 47.0 5.15e-01 86.1% 97.9%
863 9.4.1.1 beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › DAP_B 0.61 45.0 4.80e-01 86.1% 87.4%
4345683 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.58 47.0 4.62e-01 87.0% 98.4%
3074400 4023.1.1.0 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core 0.56 44.0 4.75e-01 83.5% 99.0%
4157635 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.56 45.0 4.44e-01 87.0% 98.4%
1407259 4023.1.1.1 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › DNAG_N 0.54 45.0 4.41e-01 89.6% 100.0%
5073791 3794.1.1.0 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.54 40.0 4.40e-01 89.6% 98.9%
5079230 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.53 33.0 3.42e-01 80.9% 66.7%
4523830 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.52 39.0 4.06e-01 80.0% 96.4%
3336357 3794.1.1.4 a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › MCCA_BT 0.51 41.0 3.67e-01 87.8% 86.1%
D4 medium residues 716-852_908-955
PDB
D5 medium residues 956-1028
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2erbA01 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.53 37.0 3.35e-01 94.5% 50.5%
3k49A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.52 44.0 2.89e-01 98.6% 50.7%
2qsaA00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.52 36.0 3.31e-01 74.0% 89.1%
3whjA00 6.10.140.1710 Special › Helix non-globular › Helix Hairpins › 0.52 39.0 3.42e-01 90.4% 53.2%
3ejbH02 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.52 43.0 2.99e-01 94.5% 81.7%
2imsA00 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.51 38.0 3.01e-01 82.2% 79.8%
1z9hA03 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.51 38.0 3.07e-01 82.2% 72.2%
5h5mA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.51 36.0 3.00e-01 75.3% 85.4%
3pieC01 3.40.50.12390 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 37.0 2.62e-01 80.8% 55.6%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3923519 2008.1.1.24 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDCD9 0.58 40.0 2.57e-01 71.2% 77.8%
3482665 611.3.1.0 alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.54 44.0 4.19e-01 89.0% 96.5%
3530765 192.29.1.203 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › IQUB 0.53 36.0 3.19e-01 71.2% 66.1%
3832236 650.1.1.0 alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain 0.51 31.0 3.16e-01 89.0% 60.0%
3849025 601.1.1.145 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › IQUB 0.51 38.0 3.28e-01 79.5% 70.4%
D6 medium residues 1029-1180
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.63 31.0 4.24e-01 71.7% 93.3%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 33.0 4.30e-01 72.4% 92.9%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 30.0 3.75e-01 70.4% 81.1%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 29.0 3.57e-01 73.7% 72.7%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 33.0 4.21e-01 79.6% 98.8%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 28.0 3.63e-01 74.3% 79.3%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 31.0 3.74e-01 77.0% 79.2%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 30.0 3.58e-01 73.0% 74.3%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 29.0 3.62e-01 70.4% 83.3%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 31.0 3.60e-01 70.4% 79.6%
1lxnA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 31.0 3.67e-01 70.4% 84.7%
2kloA00 1.10.10.1420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain 0.53 33.0 3.47e-01 80.9% 65.9%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 29.0 3.70e-01 74.3% 95.2%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 31.0 3.55e-01 71.1% 79.2%
2fswA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 31.0 3.59e-01 77.0% 84.3%
2kqrA01 3.30.1910.20 Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain 0.52 23.0 3.25e-01 73.7% 86.5%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 32.0 3.87e-01 80.3% 100.0%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 30.0 3.46e-01 76.3% 80.0%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 32.0 3.80e-01 89.5% 94.0%
7jgsG02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 30.0 3.53e-01 75.0% 86.7%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 30.0 3.70e-01 76.3% 95.7%
2f2eA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 29.0 3.49e-01 75.7% 89.0%
1yyvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 31.0 3.46e-01 84.9% 79.5%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 31.0 3.20e-01 78.9% 61.6%
2eshA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 34.0 3.80e-01 80.3% 90.4%
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 28.0 3.44e-01 72.4% 88.9%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 28.0 3.40e-01 78.3% 87.8%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4945934 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.61 32.0 3.65e-01 74.3% 65.2%
4985657 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 34.0 3.94e-01 77.6% 77.1%
4959073 101.1.2.271 alpha arrays › HTH › HTH › winged helix domain › B-block_TFIIIC 0.60 32.0 3.54e-01 71.7% 62.5%
5082589 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.58 30.0 3.97e-01 71.1% 91.3%
4964434 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 31.0 3.78e-01 75.7% 83.3%
4955611 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.56 31.0 3.66e-01 75.7% 76.9%
5060565 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 29.0 3.49e-01 75.7% 74.0%
3805546 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.55 35.0 3.91e-01 82.9% 82.6%
5077919 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.55 32.0 3.85e-01 79.6% 87.0%
4980177 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.55 32.0 3.57e-01 77.6% 71.7%
5007807 304.26.1.1 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like › Thiamine_BP 0.55 31.0 3.77e-01 72.4% 86.3%
4956538 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.54 29.0 3.86e-01 74.3% 100.0%
5005196 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 28.0 3.68e-01 74.3% 92.5%
4974684 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 31.0 3.71e-01 78.9% 84.0%
3189296 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.53 35.0 3.50e-01 78.3% 61.6%
3838420 304.110.1.0 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like 0.53 29.0 3.55e-01 71.1% 85.6%
4931502 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 32.0 3.94e-01 79.6% 100.0%
149370 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.53 32.0 3.56e-01 82.2% 74.8%
5079768 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 30.0 3.76e-01 78.3% 98.8%
5029803 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 31.0 3.38e-01 76.3% 67.7%
5011597 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.52 33.0 3.85e-01 88.8% 94.9%
4950221 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.52 33.0 3.73e-01 87.5% 87.0%
5025451 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.52 33.0 3.73e-01 87.5% 87.3%
5011613 101.1.2.225 alpha arrays › HTH › HTH › winged helix domain › F-93_WHD 0.52 28.0 3.40e-01 76.3% 82.1%
5039869 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.52 32.0 3.52e-01 82.9% 76.7%
5010964 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.51 32.0 3.79e-01 88.8% 94.0%
3721121 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 29.0 3.43e-01 78.9% 81.0%
5051882 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.51 33.0 3.76e-01 86.2% 89.1%
5073372 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.51 31.0 3.25e-01 80.3% 64.4%
1087087 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.51 32.0 3.31e-01 90.1% 63.7%
4946524 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 34.0 3.87e-01 90.1% 93.6%
5044327 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 31.0 3.66e-01 82.2% 92.0%
3802262 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.50 30.0 3.11e-01 71.1% 60.7%
3170512 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.50 32.0 3.65e-01 71.7% 86.4%
1109306 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.50 32.0 3.76e-01 81.6% 96.9%
D7 medium residues 1277-1341
PDB