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EU399241.1__ABY90410.1__HAPgp42__00042

Bact-Vir

EU399241.1__ABY90410.1__HAPgp42__00042

Identity

Accession:
EU399241 ↗
Kingdom:
phage

Quality

81.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Hapunavirus› Halomonas_phage_phiHAP-1

TaxID: 2914010

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 83-201
PDB
Domain cluster: rep: NC_030909.1__YP_009273724.1__BH775_gp42__00042__D69-201
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06323.18 best Phage_antiter_Q 72.4 5.40e-20 99.2% 51.8%
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w96A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 44.0 4.51e-01 74.8% 70.8%
3hi0A03 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.66 53.0 4.43e-01 84.9% 77.6%
1a52A00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.64 57.0 4.56e-01 99.2% 78.7%
2odvA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 38.0 3.94e-01 100.0% 62.5%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.63 33.0 3.33e-01 95.8% 49.6%
6q45G01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.62 40.0 3.78e-01 100.0% 53.4%
3nrwA00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.62 46.0 4.84e-01 92.4% 89.4%
3p5nA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.61 54.0 4.84e-01 99.2% 97.6%
7p3rA01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.60 37.0 2.68e-01 100.0% 22.2%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 37.0 3.89e-01 89.1% 69.5%
1t6jA03 1.10.274.20 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 0.59 47.0 5.04e-01 95.8% 100.0%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.58 37.0 4.27e-01 100.0% 89.4%
1yhlA00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.58 46.0 3.35e-01 87.4% 72.4%
4od4A01 1.10.357.140 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase 0.56 42.0 3.86e-01 78.2% 82.7%
7zm7601 1.20.120.1200 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ 0.56 33.0 2.94e-01 73.9% 40.7%
2h5gB01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.55 42.0 3.19e-01 80.7% 55.2%
1vinA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.54 41.0 3.93e-01 80.7% 71.2%
2ce7B03 1.20.58.760 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Peptidase M41 0.54 50.0 4.42e-01 100.0% 73.8%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 32.0 3.59e-01 72.3% 80.0%
2gmyD00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.53 44.0 4.10e-01 95.8% 71.7%
2i53A01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.53 45.0 4.25e-01 94.1% 94.4%
1kxpD03 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.52 36.0 4.11e-01 72.3% 100.0%
3a7kB00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.52 45.0 3.55e-01 95.8% 88.8%
2oyoA02 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.52 41.0 4.07e-01 91.6% 80.8%
2hsbA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.51 34.0 3.41e-01 86.6% 63.5%
1jkwA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.51 43.0 3.85e-01 94.1% 84.1%
7dfeA01 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.50 39.0 3.83e-01 84.9% 76.4%
4lwsA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.50 36.0 3.94e-01 99.2% 89.0%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3979886 3759.1.1.2 ↗ alpha arrays › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Phage_antiter_Q 0.96 93.0 8.29e-01 100.0% 77.4%
3978753 3759.1.1.1 ↗ alpha arrays › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Antiterm 0.82 77.0 7.50e-01 100.0% 94.6%
4963973 1203.1.2.0 ↗ alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 0.71 50.0 4.39e-01 71.4% 84.7%
5073390 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.71 51.0 5.02e-01 82.4% 70.4%
3666876 5058.1.1.0 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.70 40.0 3.86e-01 100.0% 50.8%
3279434 106.1.1.11 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › RsbRD_N 0.70 59.0 5.15e-01 90.8% 64.6%
4944631 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.68 43.0 4.39e-01 72.3% 65.2%
3871102 601.1.1.135 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DAD 0.68 37.0 4.17e-01 99.2% 68.8%
3377150 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.67 40.0 4.06e-01 100.0% 60.9%
5078899 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.66 45.0 4.64e-01 74.8% 74.5%
3209235 4177.2.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › Inhibitor of kappaB kinase beta dimerization domain › Inhibitor of kappaB kinase beta dimerization domain 0.64 40.0 3.00e-01 100.0% 27.4%
3258297 141.1.1.0 ↗ alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases 0.64 51.0 4.14e-01 85.7% 83.0%
3728766 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.61 45.0 4.15e-01 75.6% 63.3%
5012580 101.1.10.76 ↗ alpha arrays › HTH › HTH › Cyclin-like › HTH_23 0.60 48.0 4.91e-01 87.4% 87.8%
5018903 604.9.1.0 ↗ alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 0.60 41.0 4.20e-01 70.6% 78.3%
3421807 601.1.2.74 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Rx_N 0.59 38.0 3.45e-01 100.0% 48.8%
3727330 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.58 48.0 3.71e-01 90.8% 85.2%
3490818 7015.1.1.0 ↗ alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.57 35.0 3.37e-01 90.8% 51.4%
3595452 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.57 48.0 4.44e-01 94.1% 99.4%
3720288 4177.2.1.4 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › Inhibitor of kappaB kinase beta dimerization domain › Inhibitor of kappaB kinase beta dimerization domain › ATG17_like 0.56 40.0 2.96e-01 100.0% 29.5%
3949344 604.39.1.0 ↗ alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters 0.55 46.0 4.19e-01 94.1% 100.0%
5031744 601.7.1.2 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN 0.53 37.0 3.67e-01 91.6% 67.2%
3945729 604.32.1.0 ↗ alpha bundles › Spectrin repeat-like › Recombination protein uvsY › Recombination protein uvsY 0.53 39.0 3.85e-01 100.0% 70.8%
3462581 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.53 45.0 4.08e-01 94.1% 89.7%
4456477 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.53 38.0 3.30e-01 73.9% 77.7%
4817370 159.1.2.0 ↗ alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related 0.51 40.0 3.62e-01 82.4% 68.1%
4161972 3281.1.1.1 ↗ alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.51 42.0 3.05e-01 88.2% 58.5%
2968203 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.51 41.0 3.51e-01 87.4% 58.4%
4936086 601.19.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein 0.50 37.0 3.31e-01 78.2% 83.3%
3385990 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.50 40.0 4.28e-01 85.7% 98.1%
4120406 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.50 39.0 4.10e-01 100.0% 89.1%