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EU409559.1__ACB72597.1__X__00057

Bact-Vir

EU409559.1__ACB72597.1__X__00057

Identity

Accession:
EU409559 ↗
Kingdom:
phage

Quality

85.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-132
PDB
CATH (32)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 44.0 5.99e-01 86.4% 100.0%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 52.0 6.59e-01 84.0% 100.0%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 38.0 5.38e-01 70.4% 96.7%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 45.0 4.92e-01 96.8% 72.4%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 37.0 4.63e-01 80.8% 80.0%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.70 39.0 4.47e-01 92.0% 73.4%
3m8jA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.66 45.0 5.12e-01 99.2% 95.6%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.66 43.0 4.29e-01 79.2% 63.4%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 37.0 4.32e-01 83.2% 81.6%
2icwG01 1.20.120.390 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hla class ii histocompatibility antigen, dr alpha chain. Chain D, domain 1 0.62 38.0 3.88e-01 98.4% 62.1%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.60 41.0 4.00e-01 70.4% 90.8%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 29.0 3.63e-01 89.6% 80.6%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.57 52.0 4.99e-01 96.8% 95.1%
1g2nA00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.57 43.0 3.50e-01 79.2% 89.8%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.57 35.0 3.82e-01 72.0% 73.8%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.57 26.0 3.58e-01 89.6% 88.3%
3m03B00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.56 36.0 4.08e-01 72.8% 85.3%
1qdbA02 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.55 38.0 3.69e-01 99.2% 61.5%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.55 30.0 3.80e-01 99.2% 100.0%
1zylA03 1.20.1270.170 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.55 36.0 3.86e-01 95.2% 79.6%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 32.0 3.66e-01 92.8% 79.5%
6p73A02 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.55 38.0 3.66e-01 99.2% 61.5%
2ot4A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.54 37.0 4.00e-01 98.4% 81.3%
3lmfA00 1.20.1270.360 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.54 34.0 3.66e-01 100.0% 72.5%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.54 31.0 3.65e-01 100.0% 88.2%
3gi7A00 1.20.1270.180 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.52 37.0 4.01e-01 99.2% 87.4%
5zw7A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.52 40.0 3.76e-01 100.0% 66.4%
8gtzA03 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.52 41.0 3.69e-01 86.4% 78.5%
2fonA04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.51 37.0 3.72e-01 96.8% 72.9%
2q58B00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.51 42.0 3.16e-01 90.4% 81.8%
2l6hA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.51 38.0 3.53e-01 76.8% 87.7%
3ddlA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.51 45.0 3.65e-01 99.2% 91.3%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3951829 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.90 51.0 6.18e-01 82.4% 83.5%
3284051 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.85 45.0 6.14e-01 76.0% 100.0%
4876274 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.85 43.0 6.03e-01 73.6% 100.0%
3971665 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 46.0 5.91e-01 78.4% 90.7%
4336182 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 57.0 6.64e-01 89.6% 95.6%
3587538 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.84 43.0 5.79e-01 74.4% 92.6%
4146353 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.84 46.0 5.70e-01 76.0% 85.0%
3282225 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.84 51.0 6.34e-01 83.2% 96.2%
4303963 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.84 50.0 6.43e-01 70.4% 100.0%
3955987 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.83 47.0 5.37e-01 80.0% 73.7%
4388780 101.1.1.30 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.83 45.0 4.24e-01 75.2% 45.5%
4205790 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.83 50.0 6.20e-01 70.4% 95.0%
3163613 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 46.0 6.11e-01 84.0% 100.0%
3974736 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 46.0 5.57e-01 83.2% 82.4%
3289947 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 43.0 5.36e-01 84.8% 81.2%
3284011 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.81 46.0 6.00e-01 78.4% 100.0%
2464007 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.81 44.0 5.90e-01 76.8% 100.0%
4160122 101.1.1.30 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.81 48.0 4.53e-01 84.8% 49.3%
3288090 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.81 45.0 5.90e-01 77.6% 98.6%
3291331 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.81 45.0 5.54e-01 79.2% 86.3%
4289285 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.80 52.0 6.01e-01 71.2% 90.0%
4202221 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.79 42.0 5.59e-01 75.2% 95.6%
4372550 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 46.0 5.30e-01 84.8% 78.9%
3283374 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.79 45.0 5.18e-01 82.4% 74.7%
2817645 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.79 50.0 6.14e-01 92.8% 100.0%
3288971 101.1.1.30 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.79 43.0 4.06e-01 76.8% 44.7%
3959868 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 43.0 5.38e-01 75.2% 88.0%
3281471 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.78 43.0 5.27e-01 72.8% 85.0%
3971395 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.77 44.0 5.60e-01 78.4% 94.7%
3967026 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.77 44.0 5.60e-01 76.8% 94.7%
3284469 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.77 46.0 5.84e-01 81.6% 100.0%
4396640 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.77 46.0 4.71e-01 84.8% 61.7%
None 0.77 47.0 5.07e-01 93.6% 72.4%
None 0.76 44.0 4.68e-01 92.0% 64.5%
4530655 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 49.0 5.47e-01 71.2% 81.0%
4454772 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.76 41.0 5.44e-01 73.6% 100.0%
4279016 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.76 48.0 5.94e-01 85.6% 100.0%
4140444 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.75 47.0 4.99e-01 95.2% 70.9%
3971149 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.75 45.0 5.45e-01 83.2% 92.5%
None 0.75 47.0 4.98e-01 95.2% 70.9%
4233279 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.75 44.0 3.47e-01 76.8% 30.0%
4456068 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.74 51.0 5.67e-01 99.2% 88.0%
3279339 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.74 46.0 3.94e-01 86.4% 42.2%
3578154 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 44.0 5.14e-01 78.4% 84.4%
4304581 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.72 43.0 4.93e-01 92.8% 78.7%
3587755 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.72 46.0 4.55e-01 76.8% 61.5%
1810916 101.1.1.71 alpha arrays › HTH › HTH › Three-helical HTH › KORA 0.71 38.0 5.09e-01 91.2% 100.0%
5014197 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 45.0 5.13e-01 100.0% 86.3%
4059731 101.1.1.64 alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_2 0.69 46.0 4.94e-01 100.0% 79.0%
4626741 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 44.0 4.93e-01 96.8% 83.2%
3573627 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 48.0 4.89e-01 72.0% 84.0%
5011671 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 44.0 4.86e-01 93.6% 80.0%
5012037 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 44.0 5.12e-01 93.6% 90.0%
5024159 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 45.0 4.99e-01 100.0% 84.0%
3738852 101.1.1.64 alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_2 0.68 46.0 4.64e-01 99.2% 68.8%
4577850 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.68 52.0 5.78e-01 94.4% 100.0%
4994369 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 45.0 5.19e-01 100.0% 93.3%
3627888 101.1.1.64 alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_2 0.67 47.0 4.73e-01 100.0% 71.2%
5078044 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 44.0 4.75e-01 99.2% 81.0%
3279596 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.66 51.0 4.34e-01 80.0% 93.2%
4024517 101.1.1.64 alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_2 0.65 44.0 4.60e-01 98.4% 74.8%
3959876 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.64 49.0 5.46e-01 100.0% 100.0%
3977260 101.1.1.39 alpha arrays › HTH › HTH › Three-helical HTH › Phage_antitermQ 0.62 55.0 5.62e-01 98.4% 98.3%
3182958 101.1.1.64 alpha arrays › HTH › HTH › Three-helical HTH › tRNA_bind_2 0.58 46.0 4.54e-01 99.2% 78.5%
3769571 1076.1.1.6 alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › DUF2053 0.58 50.0 4.18e-01 95.2% 92.0%
3499219 1076.1.1.0 alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related 0.57 50.0 4.24e-01 96.0% 95.7%
3408518 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.56 38.0 3.80e-01 96.0% 67.2%
3263033 601.1.2.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.56 35.0 3.72e-01 78.4% 70.0%
54459 601.3.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain 0.53 37.0 3.59e-01 72.0% 79.1%
3912426 188.1.1.1 alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep 0.53 41.0 3.52e-01 85.6% 77.7%
3284180 109.3.1.160 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › EccD 0.52 41.0 3.85e-01 84.0% 73.3%
3284665 141.1.1.1 alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › polyprenyl_synt 0.51 42.0 3.17e-01 90.4% 83.3%
4236667 3615.1.1.0 alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain 0.51 46.0 3.66e-01 100.0% 65.9%
5013000 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.50 34.0 3.40e-01 96.0% 67.2%