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EU652770.3__ACF42050.1__MmP1_gp01__00001
Bact-VirEU652770.3__ACF42050.1__MmP1_gp01__00001
Identity
- Accession:
- EU652770 ↗
- Kingdom:
- phage
Quality
91.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Autographivirales›
Autotranscriptaviridae›
Minipunavirus›
Morganella_phage_MmP1
TaxID: 526118
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-115
Domain cluster:
rep: MW258709.1__QVV96840.1__X__00002__D6-96
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08684.17 best | ocr | 81.5 | 5.60e-23 | 87.5% | 94.1% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s7zA01 | 1.20.120.780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DNA mimic ocr | 0.93 | 81.0 | 8.52e-01 | 91.1% | 99.0% |
| 3f2eA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 39.0 | 4.46e-01 | 83.9% | 67.5% |
| 1a41A02 | 1.20.120.380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 | 0.65 | 41.0 | 4.41e-01 | 93.8% | 75.5% |
| 1uz3B00 | 1.10.1240.40 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › ENT domain | 0.64 | 40.0 | 4.29e-01 | 100.0% | 72.2% |
| 2imsA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.63 | 39.0 | 3.42e-01 | 90.2% | 41.1% |
| 2fm8C01 | 1.10.4150.10 | Mainly Alpha › Orthogonal Bundle › SipA N-terminal domain-like › SipA N-terminal domain-like | 0.60 | 45.0 | 3.79e-01 | 92.0% | 45.5% |
| 7e5aB02 | 1.20.1000.10 | Mainly Alpha › Up-down Bundle › Signaling Protein - Interferon-induced Guanylate-binding Protein 1; Chain A, domain 1 › Guanylate-binding protein, C-terminal domain | 0.59 | 44.0 | 3.91e-01 | 100.0% | 53.0% |
| 3akjA02 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.58 | 41.0 | 3.40e-01 | 72.3% | 86.1% |
| 2el7A02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.58 | 43.0 | 4.67e-01 | 89.3% | 92.6% |
| 4tkrA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.58 | 50.0 | 4.19e-01 | 92.0% | 91.8% |
| 2fgyA01 | 1.20.120.1310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Carboxysome Shell Carbonic Anhydrase, N-terminal helical domain | 0.56 | 29.0 | 3.02e-01 | 96.4% | 49.5% |
| 3rv0C02 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.55 | 39.0 | 3.58e-01 | 86.6% | 56.9% |
| 2f8lA01 | 1.10.150.470 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.54 | 38.0 | 4.35e-01 | 86.6% | 100.0% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 35.0 | 3.77e-01 | 98.2% | 76.8% |
| 2xhsA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.53 | 41.0 | 3.26e-01 | 93.8% | 38.7% |
| 8cdaC01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.53 | 38.0 | 3.75e-01 | 74.1% | 91.5% |
| 5uh5D02 | 1.10.132.30 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain | 0.52 | 40.0 | 3.77e-01 | 81.2% | 76.8% |
| 1st6A04 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.52 | 36.0 | 3.61e-01 | 85.7% | 68.4% |
| 3e11A00 | 3.30.2010.20 | Alpha Beta › 2-Layer Sandwich › Zincin-like › | 0.52 | 30.0 | 3.05e-01 | 83.9% | 55.3% |
| 4eeiA01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.51 | 32.0 | 3.48e-01 | 87.5% | 76.1% |
| 3b5oA00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.51 | 39.0 | 3.09e-01 | 81.2% | 81.7% |
| 5xdcB01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.50 | 36.0 | 3.65e-01 | 74.1% | 99.1% |
| 3k1hA00 | 3.30.1120.180 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 | 0.50 | 35.0 | 3.53e-01 | 86.6% | 70.4% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2834128 | 101.13.1.1 ↗ | alpha arrays › HTH › B-form DNA mimic Ocr › B-form DNA mimic Ocr › ocr | 0.90 | 80.0 | 8.11e-01 | 97.3% | 94.5% |
| 3712618 | 4120.1.1.1 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › zf-Tim10_DDP | 0.65 | 37.0 | 4.12e-01 | 81.2% | 70.0% |
| 4975933 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.62 | 47.0 | 4.91e-01 | 94.6% | 87.6% |
| 3308070 | 1075.1.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane | 0.61 | 49.0 | 3.72e-01 | 92.9% | 36.1% |
| 3529162 | 601.1.1.53 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Keratin_assoc | 0.61 | 43.0 | 4.29e-01 | 97.3% | 71.3% |
| 3903775 | 192.8.1.419 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › PF27603 | 0.57 | 34.0 | 3.38e-01 | 82.1% | 54.2% |
| 4061482 | 1079.1.1.0 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA | 0.57 | 48.0 | 3.87e-01 | 92.0% | 82.7% |
| 4472632 | 604.12.1.3 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Thia_YuaJ | 0.57 | 51.0 | 4.25e-01 | 98.2% | 81.0% |
| 3606790 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.57 | 33.0 | 3.60e-01 | 83.9% | 68.9% |
| 4940888 | 7064.1.1.1 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 | 0.57 | 50.0 | 4.28e-01 | 95.5% | 69.1% |
| 3278832 | 106.1.1.11 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › RsbRD_N | 0.56 | 42.0 | 3.95e-01 | 93.8% | 64.4% |
| 3530554 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.56 | 44.0 | 3.69e-01 | 90.2% | 48.9% |
| 4291396 | 7015.1.1.0 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain | 0.56 | 44.0 | 3.48e-01 | 100.0% | 42.8% |
| 4029964 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.56 | 40.0 | 3.61e-01 | 75.0% | 98.1% |
| 4671784 | 3755.3.1.310 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CemA | 0.56 | 41.0 | 4.08e-01 | 78.6% | 94.2% |
| 3619435 | 192.8.1.36 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › M_domain | 0.55 | 34.0 | 3.67e-01 | 76.8% | 71.6% |
| 3616195 | 603.1.1.148 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Keratin_assoc | 0.55 | 42.0 | 4.39e-01 | 86.6% | 88.3% |
| 3951009 | 4070.1.1.1 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M41 | 0.55 | 48.0 | 3.85e-01 | 99.1% | 52.2% |
| 5003725 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.54 | 37.0 | 3.96e-01 | 71.4% | 79.0% |
| 3756535 | 604.1.1.5 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_3 | 0.53 | 42.0 | 4.25e-01 | 96.4% | 83.5% |
| 3357261 | 2004.1.1.71 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › IPPT | 0.52 | 46.0 | 3.99e-01 | 95.5% | 82.4% |
| 3581262 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.52 | 37.0 | 4.01e-01 | 88.4% | 92.2% |
| 5002899 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.52 | 39.0 | 3.16e-01 | 92.9% | 41.3% |
| 3688424 | 2003.1.5.79 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 | 0.52 | 38.0 | 2.84e-01 | 77.7% | 81.3% |
| 3933742 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.52 | 46.0 | 4.05e-01 | 96.4% | 76.9% |
| 4459896 | 622.4.1.1 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › Blo-t-5 | 0.51 | 39.0 | 3.96e-01 | 91.1% | 81.6% |
| 3252622 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.50 | 36.0 | 3.87e-01 | 88.4% | 87.4% |
| 3901573 | 604.12.1.97 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › PMP22_Claudin | 0.50 | 39.0 | 4.00e-01 | 90.2% | 85.5% |
| 5078126 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.50 | 43.0 | 3.92e-01 | 96.4% | 95.5% |