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EU719189.1__ACH91314.1__X__00023

Bact-Vir

EU719189.1__ACH91314.1__X__00023

Identity

Accession:
EU719189 ↗
Kingdom:
phage

Quality

72.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Colneyvirus› Clostridioides_phage_phiCD27

TaxID: 2849704

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 74-154
PDB
Domain cluster: rep: NC_004827.1__NP_852777.1__Aaphi23p49__00063__D109-193
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10076.15 best Phage_Mu_Gp48 43.4 4.30e-11 96.3% 50.0%
CATH (60)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2z51A02 3.30.300.130 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Fe-S cluster assembly (FSCA) 0.75 54.0 5.70e-01 75.3% 93.1%
4oxiA02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.75 56.0 5.24e-01 79.0% 72.4%
4gs5A02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.74 54.0 4.99e-01 77.8% 66.7%
3bioA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.73 53.0 4.72e-01 76.5% 56.1%
6h1bA02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.72 54.0 5.00e-01 79.0% 69.6%
6vhvA01 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.72 54.0 5.17e-01 79.0% 71.0%
1amuA04 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.72 54.0 5.08e-01 79.0% 71.9%
2d27A02 3.30.300.160 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Type II secretion system, protein E, N-terminal domain 0.72 47.0 4.70e-01 79.0% 64.7%
4y2fA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.71 57.0 4.74e-01 87.7% 95.1%
5llyA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.71 57.0 4.42e-01 88.9% 100.0%
3iplA02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.70 52.0 5.23e-01 79.0% 83.1%
4alzA02 3.30.1340.30 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › 0.70 51.0 5.50e-01 77.8% 92.6%
2e8eA00 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.70 57.0 4.77e-01 86.4% 95.5%
3bypA00 3.30.70.1350 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cation efflux protein, cytoplasmic domain 0.70 51.0 5.14e-01 77.8% 87.8%
6o6eB02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.70 52.0 4.76e-01 79.0% 63.6%
4l4qA02 3.30.300.340 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › S-adenosylmethionine synthetase, N-terminal domain 0.70 51.0 4.43e-01 77.8% 80.3%
1ylqA00 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.70 52.0 5.00e-01 80.2% 81.7%
5o5jC01 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.70 51.0 5.00e-01 79.0% 80.0%
4alzA01 3.30.1340.30 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › 0.68 49.0 5.37e-01 80.2% 98.4%
1no5B00 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.68 51.0 4.74e-01 80.2% 71.6%
1hh2P04 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.67 50.0 5.32e-01 79.0% 95.6%
2xr1A02 3.30.300.20 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain 0.67 49.0 5.19e-01 79.0% 94.4%
3iteB02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.67 50.0 4.78e-01 79.0% 78.5%
3c6vA00 3.30.429.10 Alpha Beta › 2-Layer Sandwich › Macrophage Migration Inhibitory Factor › Macrophage Migration Inhibitory Factor 0.67 50.0 4.18e-01 80.2% 64.3%
2gx5C00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.67 54.0 4.41e-01 91.4% 97.5%
2rffA00 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.66 49.0 4.40e-01 79.0% 63.1%
4p72A03 3.50.40.10 Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 0.64 51.0 3.86e-01 86.4% 81.9%
3proC02 3.30.300.50 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › 0.64 44.0 4.63e-01 77.8% 81.4%
4alzA03 3.30.70.1770 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 46.0 5.01e-01 79.0% 100.0%
1qy9A02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.63 45.0 3.64e-01 76.5% 45.4%
5g5gC03 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.62 38.0 3.68e-01 97.5% 53.8%
3vseB02 3.30.750.80 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › RNA methyltransferase domain (HRMD) like 0.62 54.0 5.04e-01 98.8% 87.0%
2kdnA00 3.30.300.90 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like 0.61 54.0 4.89e-01 97.5% 82.4%
3v8hC00 3.30.572.10 Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain 0.61 52.0 3.62e-01 96.3% 67.0%
1qlmA01 3.10.340.11 Alpha Beta › Roll › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 1 › Methenyltetrahydromethanopterin Cyclohydrolase; Chain A, domain 1 0.61 43.0 3.83e-01 74.1% 62.7%
6upsA01 3.40.395.10 Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A 0.61 49.0 4.08e-01 92.6% 72.9%
2kgsA01 3.40.1520.20 Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › 0.60 48.0 4.31e-01 85.2% 75.5%
1zejA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 47.0 3.80e-01 87.7% 98.2%
3mogA03 3.30.750.190 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.58 48.0 4.59e-01 91.4% 88.3%
1bdgA01 3.40.367.20 Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › 0.58 51.0 3.54e-01 100.0% 96.1%
1w5fA02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.57 42.0 3.66e-01 76.5% 61.7%
2o3jB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 47.0 3.51e-01 91.4% 100.0%
2rrlA01 3.30.750.140 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.57 49.0 4.43e-01 98.8% 78.3%
4j0eA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 46.0 3.54e-01 91.4% 93.1%
1ofuA02 3.30.1330.20 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Tubulin/FtsZ, C-terminal domain 0.56 41.0 3.92e-01 76.5% 79.6%
3qocA00 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.56 43.0 3.70e-01 82.7% 58.1%
3ejgA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.56 39.0 3.13e-01 97.5% 35.8%
3ju8A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.56 49.0 3.40e-01 100.0% 37.2%
7y11A01 3.40.525.10 Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain 0.55 40.0 3.03e-01 96.3% 31.0%
5kf6A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.55 48.0 3.45e-01 100.0% 38.4%
5ce6A01 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.55 46.0 3.76e-01 96.3% 61.6%
6a8mA01 3.40.350.10 Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain 0.54 45.0 3.66e-01 97.5% 60.8%
4i9cA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 40.0 3.03e-01 98.8% 31.2%
3ejfA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.52 37.0 3.04e-01 97.5% 36.7%
5vbfA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.52 44.0 3.12e-01 100.0% 42.7%
1urhA02 3.40.250.10 Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain 0.51 35.0 3.18e-01 96.3% 49.6%
5z7qA00 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.51 42.0 3.27e-01 90.1% 58.5%
1wtyA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.51 39.0 3.52e-01 84.0% 87.1%
1wloA00 3.90.1010.10 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.50 42.0 3.62e-01 96.3% 93.4%
2c1iA01 3.30.565.50 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › 0.50 34.0 3.11e-01 70.4% 82.9%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5003241 102.7.1.1 ↗ alpha arrays › HhH/H2TH › Baseplate wedge protein gp7 domain IV › Baseplate wedge protein gp7 domain IV › Tail_P2_I 0.83 76.0 6.73e-01 100.0% 79.1%
4989453 327.3.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain 0.78 58.0 5.95e-01 77.8% 82.1%
4993777 327.3.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain 0.78 58.0 5.65e-01 77.8% 73.9%
4952836 327.3.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain 0.77 57.0 5.50e-01 77.8% 72.2%
4442243 327.1.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Alpha-lytic protease prodomain › Alpha-lytic protease prodomain › Pro_Al_protease 0.75 52.0 5.57e-01 79.0% 82.9%
3947813 316.1.1.46 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › SseB_C 0.75 55.0 5.10e-01 76.5% 74.0%
4985202 327.5.1.10 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › PF27533 0.75 56.0 5.23e-01 79.0% 68.0%
1487481 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.75 56.0 5.22e-01 79.0% 71.7%
4545217 298.1.1.16 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DAPDH_C 0.75 54.0 4.36e-01 76.5% 54.2%
4223070 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.75 56.0 5.19e-01 79.0% 64.0%
3351249 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.74 55.0 4.76e-01 79.0% 57.6%
5004556 327.20.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Baseplate structural protein gp6 C-terminal domain I › Baseplate structural protein gp6 C-terminal domain I › PF26078 0.74 66.0 6.14e-01 97.5% 99.0%
3328663 327.7.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.73 55.0 5.52e-01 79.0% 87.5%
4612999 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.73 55.0 5.20e-01 79.0% 67.4%
4304198 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.73 55.0 4.99e-01 79.0% 61.0%
4100012 327.13.1.5 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › SpoIIIAH 0.73 54.0 4.72e-01 77.8% 53.4%
4517224 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.73 55.0 5.09e-01 79.0% 64.0%
4941550 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.73 54.0 4.75e-01 79.0% 67.5%
4010543 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.73 54.0 5.16e-01 79.0% 74.7%
3744741 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.73 53.0 4.99e-01 77.8% 70.0%
3415221 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.73 54.0 5.36e-01 79.0% 83.5%
4940572 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.72 54.0 4.18e-01 79.0% 44.0%
3285167 327.7.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.72 53.0 3.96e-01 77.8% 35.5%
3347693 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.72 53.0 4.72e-01 77.8% 61.7%
3958042 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.72 53.0 4.78e-01 77.8% 63.6%
3525048 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.72 54.0 5.00e-01 79.0% 65.0%
5081655 316.1.1.27 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.72 52.0 4.87e-01 76.5% 71.0%
5070325 327.11.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) › KH_2 0.72 53.0 5.46e-01 77.8% 86.7%
5050305 316.1.1.27 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.71 52.0 4.42e-01 77.8% 55.6%
5030238 316.1.1.27 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.71 53.0 4.82e-01 77.8% 67.6%
4863910 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.71 50.0 5.11e-01 74.1% 76.2%
3178317 327.5.1.6 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-dom_DIP2-like 0.71 52.0 4.51e-01 79.0% 53.8%
3941186 327.7.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer 0.71 53.0 5.01e-01 79.0% 74.7%
4602065 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.71 53.0 4.70e-01 79.0% 60.9%
4412985 327.10.1.3 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related › DnaA_N 0.71 52.0 5.03e-01 77.8% 88.9%
4254411 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.70 53.0 4.90e-01 79.0% 69.0%
3739731 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.70 52.0 4.89e-01 79.0% 65.0%
5014917 327.7.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.70 50.0 5.47e-01 75.3% 93.8%
4485602 327.13.1.14 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › Yop-YscD_ppl_3rd 0.69 51.0 5.38e-01 77.8% 90.0%
5027878 316.1.1.27 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.69 51.0 4.59e-01 77.8% 65.5%
3958269 3261.1.1.0 ↗ a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb 0.69 48.0 5.34e-01 80.2% 96.7%
4946041 327.11.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.69 50.0 5.42e-01 76.5% 100.0%
3596245 232.1.1.0 ↗ a+b duplicates or obligate multimers › Pentein › Pentein › Pentein 0.69 50.0 3.46e-01 77.8% 47.7%
4944781 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.69 50.0 4.57e-01 77.8% 69.1%
4390935 298.1.1.16 ↗ a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › DAPDH_C 0.68 50.0 3.35e-01 79.0% 42.9%
3056798 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.68 49.0 5.28e-01 80.2% 93.8%
5028322 316.1.1.27 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.68 50.0 4.73e-01 79.0% 72.7%
5078295 316.1.1.27 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.68 50.0 4.30e-01 79.0% 76.2%
5028843 316.1.1.27 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.67 48.0 4.49e-01 76.5% 70.5%
5029313 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.67 49.0 4.61e-01 77.8% 66.0%
3348189 327.7.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like 0.67 50.0 4.98e-01 80.2% 82.4%
5044614 3261.1.1.1 ↗ a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON 0.67 49.0 5.31e-01 77.8% 96.9%
4991181 327.11.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.67 49.0 5.30e-01 77.8% 98.5%
4933441 327.11.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.67 45.0 4.93e-01 77.8% 87.7%
5058410 316.1.1.27 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.67 49.0 4.57e-01 79.0% 71.4%
4977836 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.67 49.0 3.20e-01 79.0% 18.4%
3963574 3261.1.1.0 ↗ a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb 0.67 48.0 5.08e-01 77.8% 88.6%
5079745 316.1.1.27 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.66 49.0 4.11e-01 79.0% 52.1%
4967173 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.66 48.0 4.46e-01 77.8% 73.3%
4056205 327.1.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Alpha-lytic protease prodomain › Alpha-lytic protease prodomain › Pro_Al_protease 0.66 46.0 5.01e-01 79.0% 92.3%
5027454 316.1.1.27 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.66 48.0 4.25e-01 77.8% 57.5%
5072447 316.1.1.27 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.66 48.0 4.44e-01 77.8% 70.5%
5072985 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.66 48.0 4.49e-01 77.8% 78.0%
196923 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.66 49.0 4.40e-01 79.0% 63.1%
4934851 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.65 48.0 4.54e-01 79.0% 78.0%
4955521 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.65 47.0 4.11e-01 77.8% 57.7%
4986446 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.65 48.0 4.41e-01 77.8% 68.6%
3287751 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.65 53.0 3.96e-01 88.9% 82.4%
5071890 316.1.1.27 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta 0.65 47.0 4.00e-01 77.8% 50.0%
3711262 3261.1.1.0 ↗ a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb 0.64 48.0 4.66e-01 80.2% 86.7%
4958311 327.2.1.3 ↗ a+b two layers › Alpha-lytic protease prodomain-like › BolA-like › BolA-like › NTP_transf_2 0.64 46.0 4.58e-01 77.8% 90.6%
4951625 3261.1.1.0 ↗ a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb 0.63 46.0 4.61e-01 80.2% 74.1%
5030647 316.1.1.2 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 0.63 46.0 4.05e-01 79.0% 55.2%
3458706 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.62 55.0 3.56e-01 97.5% 63.3%
4374787 131.1.1.15 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III 0.62 51.0 3.92e-01 92.6% 86.4%
4096071 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.62 45.0 3.56e-01 79.0% 61.1%
3391353 224.1.1.2 ↗ a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin 0.62 54.0 3.24e-01 100.0% 31.0%
4186203 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.61 45.0 3.49e-01 79.0% 57.4%
4530977 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.61 45.0 3.48e-01 79.0% 59.5%
4991044 324.1.1.0 ↗ a+b two layers › OsmC-like › OsmC-like › OsmC-like 0.59 47.0 4.63e-01 86.4% 84.1%
4340675 3186.1.1.1 ↗ a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › Flg_hook 0.59 49.0 4.83e-01 96.3% 97.8%
4096833 2492.1.1.15 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_2 0.59 40.0 3.58e-01 70.4% 83.5%
4532164 2003.1.1.46 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › F420_oxidored 0.58 47.0 3.56e-01 87.7% 97.4%
5002667 131.1.1.15 ↗ alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › Ppx-GppA_III 0.57 49.0 3.81e-01 98.8% 69.9%
3838476 3186.1.1.1 ↗ a+b two layers › C-terminal domain of FliK › C-terminal domain of FliK › C-terminal domain of FliK › Flg_hook 0.56 46.0 4.55e-01 92.6% 100.0%
5028121 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.56 43.0 3.80e-01 86.4% 70.8%
5029451 601.7.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain 0.55 44.0 3.56e-01 85.2% 74.0%
3940253 601.1.1.114 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › I_LWEQ, TLN1-like_RS, Talin_VBS2 0.51 41.0 2.75e-01 90.1% 25.8%
D2 medium residues 1-73
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10076.15 best Phage_Mu_Gp48 46.3 5.60e-12 90.4% 41.3%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4iw9A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.63 44.0 3.77e-01 72.6% 67.3%
3anwA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 47.0 4.04e-01 90.4% 93.8%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3943565 1049.2.1.0 ↗ alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain 0.78 68.0 5.90e-01 95.9% 73.6%
4514735 1049.2.1.4 ↗ alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › Baseplate_J 0.76 67.0 4.92e-01 97.3% 86.8%
3973303 1049.2.1.3 ↗ alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › PF26776 0.75 65.0 5.61e-01 97.3% 82.6%
4957574 1049.2.1.0 ↗ alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain 0.72 63.0 5.80e-01 97.3% 78.9%
3684484 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.69 52.0 3.88e-01 80.8% 88.9%
4888809 1049.2.1.1 ↗ alpha duplicates or obligate multimers › Baseplate wedge protein gp7 helical domain-like › Baseplate wedge protein gp6 helical domain › Baseplate wedge protein gp6 helical domain › Gp6-like_1st 0.61 51.0 4.37e-01 97.3% 64.0%
3251029 7512.1.1.10 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_28 0.60 41.0 2.90e-01 78.1% 22.1%