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EU822883.1__ACH72941.1__X__00022

Bact-Vir

EU822883.1__ACH72941.1__X__00022

Identity

Accession:
EU822883 ↗
Kingdom:
phage

Quality

95.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Burkholderia_phage_KS10

TaxID: 557289

Cluster

View cluster (28 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-59
PDB
Domain cluster: rep: BX571876.1__CAE14765.1__LE1-0065__00065__D1-65
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3iuwA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.82 71.0 6.39e-01 100.0% 70.9%
1xneA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.80 62.0 5.00e-01 100.0% 44.2%
1sgvA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.74 53.0 5.24e-01 100.0% 71.4%
8a8gA01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.72 64.0 4.83e-01 100.0% 60.7%
2gksB01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.69 60.0 4.57e-01 100.0% 61.7%
2j5vA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.68 56.0 4.86e-01 100.0% 58.5%
2b78A01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.65 51.0 4.95e-01 100.0% 78.8%
3r90A00 3.10.400.20 Alpha Beta › Roll › Sulfate adenylyltransferase › 0.65 55.0 3.95e-01 100.0% 31.4%
2as0A01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.64 52.0 4.93e-01 98.3% 77.1%
3c0kA01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.63 52.0 4.93e-01 100.0% 77.5%
2kksA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.57 41.0 3.17e-01 100.0% 32.2%
3d37B01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.57 50.0 3.62e-01 100.0% 36.2%
5go5A00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.55 46.0 3.55e-01 100.0% 52.6%
1d7kB01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.54 47.0 3.67e-01 100.0% 45.9%
4xg1A01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.54 45.0 3.34e-01 100.0% 34.7%
7uehA01 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.53 45.0 3.64e-01 96.6% 85.5%
2yx1A02 3.30.300.110 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Met-10+ protein-like domains 0.53 38.0 3.55e-01 98.3% 61.0%
3fn5B00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.53 44.0 3.33e-01 100.0% 54.6%
2nvaA01 2.40.37.10 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 0.52 43.0 3.51e-01 100.0% 46.1%
3h4rA00 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.52 45.0 3.09e-01 100.0% 33.8%
1a3wA01 3.40.1380.20 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain 0.51 43.0 3.21e-01 94.9% 67.1%
2v5gA00 3.40.1690.10 Alpha Beta › 3-Layer(aba) Sandwich › name from scop › secretion proteins EscU 0.51 36.0 2.90e-01 76.3% 36.7%
1euvA02 3.30.310.130 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Ubiquitin-related 0.51 43.0 3.64e-01 98.3% 86.7%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5070577 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.87 77.0 6.11e-01 100.0% 50.9%
4953076 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.85 74.0 5.74e-01 100.0% 46.7%
4950776 1.1.9.7 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.81 69.0 5.19e-01 100.0% 40.0%
4133629 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.79 57.0 5.73e-01 100.0% 76.7%
4262578 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.78 63.0 6.10e-01 100.0% 80.0%
4564300 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.77 66.0 5.91e-01 100.0% 68.8%
4999516 1.1.9.3 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE 0.76 66.0 4.99e-01 100.0% 41.5%
4237622 1.1.9.10 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB_C 0.76 57.0 5.72e-01 100.0% 80.0%
4051888 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.75 62.0 5.80e-01 100.0% 73.0%
4928024 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.74 62.0 4.78e-01 100.0% 42.2%
4504459 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.72 59.0 5.51e-01 100.0% 72.0%
4258656 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.72 60.0 5.57e-01 100.0% 73.0%
4950763 1.1.9.3 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE 0.71 63.0 4.70e-01 100.0% 43.0%
3417774 1.1.9.29 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › Dev_Cell_Death 0.71 60.0 4.61e-01 100.0% 41.5%
3268569 1.1.9.34 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF26292 0.70 58.0 5.02e-01 98.3% 57.9%
4581759 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.69 58.0 4.75e-01 100.0% 50.9%
4240947 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.69 58.0 5.48e-01 100.0% 78.6%
4124187 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.69 58.0 5.02e-01 100.0% 61.1%
5016306 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.68 61.0 5.27e-01 100.0% 71.1%
4562298 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.68 56.0 4.55e-01 100.0% 47.8%
4408562 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.68 57.0 4.62e-01 100.0% 48.7%
4101732 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.68 56.0 5.34e-01 98.3% 78.6%
3602892 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.67 54.0 5.26e-01 98.3% 81.5%
5015753 1.1.9.17 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.66 53.0 5.19e-01 98.3% 81.5%
4943450 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.66 54.0 4.83e-01 98.3% 63.5%
4950281 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.64 56.0 5.20e-01 100.0% 94.7%
5067380 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.63 54.0 4.17e-01 100.0% 65.0%
3590925 1.1.9.17 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_3 0.63 54.0 5.27e-01 98.3% 92.3%
4577914 11.1.1.33 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin 0.56 47.0 3.42e-01 100.0% 35.1%
4948558 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 44.0 4.03e-01 100.0% 64.7%
3212023 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.55 41.0 2.70e-01 100.0% 17.5%
3970672 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 43.0 3.33e-01 100.0% 35.5%
3199622 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.55 44.0 3.54e-01 100.0% 49.7%
3500538 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.54 47.0 3.65e-01 100.0% 78.3%
4536179 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.54 47.0 3.56e-01 100.0% 73.3%
4972566 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.54 47.0 3.77e-01 100.0% 80.8%
4007333 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.53 46.0 3.62e-01 98.3% 76.9%
2553360 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.53 46.0 3.58e-01 100.0% 78.1%
5069398 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.53 45.0 3.69e-01 100.0% 84.2%
3961015 10.12.1.0 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.53 36.0 3.27e-01 100.0% 50.6%
3819990 7515.1.1.8 ↗ a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Metalloenzyme 0.53 45.0 2.86e-01 98.3% 79.1%
3743872 2008.2.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like 0.52 44.0 3.61e-01 100.0% 54.2%
4184526 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.52 45.0 3.62e-01 98.3% 82.5%
3698391 242.3.1.1 ↗ a+b two layers › Homing endonucleases-like › DNA repair protein MutS, domain I › DNA repair protein MutS, domain I › MutS_I 0.51 46.0 3.58e-01 100.0% 71.2%
3888351 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.50 44.0 2.79e-01 100.0% 33.5%
4178402 1054.1.1.1 ↗ alpha bundles › Arginine decarboxylase C-terminal helical extension › Arginine decarboxylase C-terminal helical extension › Arginine decarboxylase C-terminal helical extension › Arg_decarbox_C 0.50 41.0 2.82e-01 100.0% 25.5%
4949381 7518.1.1.1 ↗ a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C 0.50 44.0 3.39e-01 100.0% 71.2%
D2 medium residues 60-125
PDB
Domain cluster: rep: MZ436628.1__QXN68023.1__X__00040__D63-127
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1eucB01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.63 54.0 4.19e-01 100.0% 66.5%
6melB01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.63 54.0 4.19e-01 100.0% 66.5%
1xdnA02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.62 52.0 4.09e-01 100.0% 65.8%
1jllB01 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.61 52.0 4.07e-01 100.0% 66.5%
6qpwA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 41.0 3.18e-01 72.7% 30.7%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.58 43.0 3.81e-01 81.8% 54.7%
3fgtA01 2.10.70.60 Mainly Beta › Ribbon › Complement Module; domain 1 › Phospholipase B-like, domain 1 0.55 32.0 3.44e-01 98.5% 67.3%
2x5rA01 3.30.470.40 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › 0.55 47.0 3.96e-01 97.0% 55.7%
2wfwA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 38.0 3.97e-01 97.0% 84.5%
2avxA00 3.30.450.80 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain 0.53 44.0 3.38e-01 98.5% 59.6%
4bkwA03 3.30.500.40 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.52 40.0 3.37e-01 97.0% 46.0%
2wg5F02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 37.0 3.85e-01 95.5% 84.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3211533 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.58 44.0 3.56e-01 87.9% 90.3%
None — 0.56 50.0 3.07e-01 100.0% 19.0%
4344729 2005.1.1.38 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CTU2 0.56 49.0 3.07e-01 100.0% 66.1%
3405565 221.1.1.6 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.52 37.0 3.39e-01 78.8% 100.0%
3576143 221.1.1.113 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_3 0.51 39.0 3.40e-01 86.4% 94.5%