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EU822883.1__ACH72948.1__X__00029

Bact-Vir

EU822883.1__ACH72948.1__X__00029

Identity

Accession:
EU822883 ↗
Kingdom:
phage

Quality

83.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-93
PDB
D2 medium residues 98-148
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ymmA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.81 56.0 4.92e-01 72.5% 54.8%
1xx7A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.79 56.0 3.79e-01 74.5% 61.0%
2w43A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.77 51.0 4.94e-01 70.6% 61.4%
2o35A00 1.10.3340.10 Mainly Alpha › Orthogonal Bundle › SMc04008-like fold › SMc04008-like 0.76 66.0 5.75e-01 98.0% 84.8%
2no4A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.74 51.0 4.52e-01 72.5% 52.0%
3s4lA00 1.10.3210.30 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › 0.74 53.0 3.56e-01 78.4% 20.3%
16vpA00 1.10.1290.10 Mainly Alpha › Orthogonal Bundle › Conserved core of transcriptional regulatory protein vp16 › Alpha trans-inducing (Alpha-TIF) 0.73 54.0 3.28e-01 76.5% 50.8%
7ccmB01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.72 55.0 4.11e-01 88.2% 39.9%
4qunA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.72 59.0 3.68e-01 92.2% 60.4%
2ivxB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.71 50.0 3.63e-01 74.5% 32.9%
3b0bB00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.71 48.0 3.94e-01 70.6% 40.2%
3ww3A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.71 50.0 3.20e-01 74.5% 15.8%
1tfeA02 1.10.286.20 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › 0.71 48.0 5.10e-01 72.5% 88.9%
2b2hA00 1.10.3430.10 Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains 0.71 50.0 2.97e-01 74.5% 13.3%
4v19K02 1.10.10.250 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L11/L12, C-terminal domain 0.70 57.0 5.12e-01 94.1% 85.3%
3crvA02 1.10.275.30 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › 0.70 50.0 3.90e-01 76.5% 62.0%
1ks9A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.70 55.0 4.24e-01 90.2% 48.0%
1wtyA00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.69 52.0 3.92e-01 80.4% 86.2%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 3.66e-01 72.5% 83.9%
7pl7A01 3.90.70.80 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.67 49.0 3.49e-01 78.4% 56.6%
1mzbA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 46.0 3.94e-01 90.2% 45.1%
3vw4A01 1.10.340.50 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › 0.66 53.0 4.45e-01 90.2% 55.4%
3bm1A00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.66 50.0 3.42e-01 82.4% 62.7%
3fp3A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.66 50.0 3.66e-01 82.4% 31.9%
2h92A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.65 56.0 3.64e-01 94.1% 74.5%
2wvxA04 1.20.1610.10 Mainly Alpha › Up-down Bundle › Glycosyl hydrolase family fold › alpha-1,2-mannosidases domains 0.65 46.0 3.16e-01 74.5% 34.7%
2ew2A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.65 51.0 3.89e-01 90.2% 45.5%
2ogiB00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.65 46.0 3.09e-01 72.5% 26.9%
3b8iC00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.64 49.0 3.05e-01 82.4% 76.6%
3vkhA08 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 52.0 3.16e-01 90.2% 22.2%
3cf6E03 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.62 50.0 3.75e-01 92.2% 45.8%
1fmjA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 54.0 3.26e-01 100.0% 63.2%
3d3oA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.61 50.0 3.58e-01 100.0% 35.2%
1gakA00 1.20.150.10 Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein 0.61 41.0 3.09e-01 72.5% 50.4%
3u9rB02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.60 53.0 3.37e-01 100.0% 57.0%
2uytA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 48.0 3.12e-01 90.2% 74.6%
1ecaA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.59 48.0 3.61e-01 92.2% 83.8%
2rfqB01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.58 47.0 3.77e-01 94.1% 89.0%
1wgfA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.56 37.0 3.74e-01 70.6% 67.9%
1g2rA00 3.30.1230.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like 0.55 46.0 3.81e-01 96.1% 80.9%
4dccA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.54 45.0 4.06e-01 100.0% 67.6%
2g5gX02 1.10.8.760 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Haem-binding uptake, Tiki superfamily, ChaN, domain 2 0.50 34.0 3.36e-01 74.5% 69.5%
2c4nA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.50 43.0 3.19e-01 100.0% 47.3%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4256283 5051.1.1.12 alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Trp_Tyr_perm 0.98 66.0 3.80e-01 70.6% 9.8%
4992019 304.25.1.1 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer 0.89 62.0 4.33e-01 72.5% 45.5%
4163949 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.88 56.0 4.76e-01 80.4% 42.5%
4588724 148.1.3.49 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Hda_lid 0.86 57.0 4.94e-01 80.4% 46.7%
2776079 3787.1.1.0 alpha bundles › HAD superfamily helical bundle insertion domain 0.85 58.0 5.57e-01 70.6% 63.2%
4955130 2006.1.4.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN 0.83 58.0 4.65e-01 72.5% 39.8%
3831795 589.1.2.1 alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C 0.82 57.0 3.73e-01 72.5% 18.0%
4560977 5046.1.1.1 extended segments › F-type ATP synthase subunit b › F-type ATP synthase subunit b › F-type ATP synthase subunit b › ATP-synt_B 0.81 55.0 3.78e-01 70.6% 23.7%
4350523 101.11.1.1 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.81 64.0 5.15e-01 88.2% 53.0%
5017995 2006.1.4.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN 0.80 55.0 4.08e-01 72.5% 32.8%
3603035 2006.1.4.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.79 55.0 4.42e-01 72.5% 39.4%
5012602 2006.1.4.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN 0.77 53.0 4.01e-01 72.5% 48.3%
170157 4245.1.1.1 alpha duplicates or obligate multimers › SMc04008-like › SMc04008-like › SMc04008-like › DUF1244 0.77 67.0 5.38e-01 98.0% 68.4%
4928364 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.77 54.0 3.92e-01 82.4% 27.5%
3260615 103.4.1.5 alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX_2 0.76 53.0 4.48e-01 74.5% 50.6%
5000599 378.1.1.0 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.76 66.0 4.52e-01 100.0% 48.3%
7584 816.1.1.1 a+b complex topology › Conserved core of transcriptional regulatory protein vp16 › Conserved core of transcriptional regulatory protein vp16 › Conserved core of transcriptional regulatory protein vp16 › Alpha_TIF 0.73 54.0 3.29e-01 76.5% 52.1%
3929347 7579.1.1.70 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF1057 0.73 59.0 3.63e-01 92.2% 16.2%
4103293 101.1.2.62 alpha arrays › HTH › HTH › winged helix domain › Sigma54_DBD 0.72 50.0 4.37e-01 74.5% 47.5%
3590551 101.1.2.244 alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.72 50.0 5.06e-01 90.2% 74.0%
3942452 101.1.2.244 alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.72 51.0 4.56e-01 92.2% 54.3%
3981939 101.1.1.202 alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 0.72 50.0 4.94e-01 92.2% 69.1%
3654648 103.9.1.0 alpha arrays › RuvA-C › RanGAP2 N-terminal domain › RanGAP2 N-terminal domain 0.71 49.0 4.40e-01 70.6% 55.7%
3984964 101.1.2.244 alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.71 48.0 4.21e-01 92.2% 48.0%
3867110 4954.1.1.1 a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 0.71 61.0 4.17e-01 100.0% 44.2%
5072566 604.4.1.0 alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP 0.71 57.0 5.14e-01 86.3% 81.4%
4411256 2004.1.1.80 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin 0.71 60.0 3.83e-01 92.2% 70.5%
5044210 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 58.0 5.22e-01 90.2% 65.7%
3983493 101.1.2.244 alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.71 48.0 4.84e-01 92.2% 72.0%
4279089 7094.1.1.3 alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › OPA1_C 0.71 57.0 4.35e-01 90.2% 40.0%
3408723 101.1.1.65 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 0.70 58.0 4.91e-01 92.2% 80.0%
3922887 7579.1.1.89 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › COesterase, BD-FAE 0.70 64.0 3.62e-01 100.0% 35.5%
3259602 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 56.0 4.56e-01 90.2% 49.0%
4351255 191.1.1.91 alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › PF29842 0.70 57.0 4.73e-01 90.2% 84.4%
3444901 4954.1.1.0 a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit 0.70 52.0 3.59e-01 80.4% 24.6%
3643664 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.70 56.0 4.92e-01 88.2% 66.7%
3504540 101.1.2.244 alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.69 49.0 4.79e-01 92.2% 69.1%
3849734 101.1.1.65 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 0.69 56.0 4.73e-01 90.2% 82.4%
4008378 101.1.2.244 alpha arrays › HTH › HTH › winged helix domain › HTH_21 0.68 48.0 4.70e-01 92.2% 69.1%
5055205 4954.1.1.1 a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 0.68 51.0 3.83e-01 80.4% 42.3%
3602043 6076.1.1.0 alpha arrays › Catalytic cysteine domain in ubiquitin-activating enzyme › Catalytic cysteine domain in ubiquitin-activating enzyme › Catalytic cysteine domain in ubiquitin-activating enzyme 0.67 57.0 4.53e-01 96.1% 94.3%
3968957 1075.3.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 0.66 48.0 3.21e-01 82.4% 19.0%
5058284 2004.1.1.14 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU 0.66 53.0 3.51e-01 88.2% 80.5%
3909938 101.1.1.65 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 0.66 53.0 4.46e-01 90.2% 75.6%
3709807 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.66 57.0 3.47e-01 100.0% 19.4%
3333058 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.63 55.0 4.26e-01 100.0% 45.7%
3195161 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.62 47.0 4.66e-01 86.3% 78.2%
3219149 109.1.1.0 alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.62 48.0 3.41e-01 86.3% 32.5%
3368926 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 54.0 4.96e-01 100.0% 80.0%
3879373 621.1.1.1 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › GBP_C 0.58 51.0 3.11e-01 100.0% 28.0%
4431528 101.8.1.2 alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 0.53 43.0 2.85e-01 90.2% 28.4%