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EU826466.1__ACH62170.1__MYRNA_201__00162

Bact-Vir

EU826466.1__ACH62170.1__MYRNA_201__00162

Identity

Accession:
EU826466 ↗
Kingdom:
phage

Quality

81.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Myrnavirus› Mycobacterium_phage_Myrna

TaxID: 546805

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 16-138
PDB
Domain cluster: rep: HM114277.1__AEQ21077.1__E3_1600__00169__D9-113
D2 medium residues 184-242
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1wpaA01 6.10.140.340 Special › Helix non-globular › Helix Hairpins › 0.74 51.0 4.29e-01 98.3% 43.4%
1vf6C00 1.10.287.650 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain 0.70 39.0 4.11e-01 83.1% 60.8%
3cjlA00 3.10.20.850 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Protein of unknown function DUF3861 0.53 37.0 3.38e-01 76.3% 78.4%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3504389 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.77 46.0 4.11e-01 74.6% 45.0%
3396619 101.1.1.112 ↗ alpha arrays › HTH › HTH › Three-helical HTH › MADF_DNA_bdg 0.74 54.0 4.45e-01 76.3% 53.0%
4999517 2004.1.1.156 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.74 47.0 2.98e-01 83.1% 14.1%
3652177 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.71 55.0 4.62e-01 81.4% 56.4%
3420021 101.1.1.121 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 0.70 54.0 4.25e-01 84.7% 64.8%
3372947 912.1.1.0 ↗ few secondary structure elements › HIV-1 VPU cytoplasmic domain › HIV-1 VPU cytoplasmic domain › HIV-1 VPU cytoplasmic domain 0.58 42.0 3.05e-01 78.0% 28.0%
4169956 604.12.1.26 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › HemX 0.53 40.0 3.69e-01 81.4% 100.0%
3793054 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.52 46.0 3.88e-01 100.0% 65.0%