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EU826466.1__ACH62180.1__MYRNA_213__00172
Bact-VirEU826466.1__ACH62180.1__MYRNA_213__00172
Identity
- Accession:
- EU826466 ↗
- Kingdom:
- phage
Quality
64.7
mean pLDDT
Taxonomy
TaxID: 546805
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-66
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3uoeA01 | 1.10.1530.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel | 0.65 | 46.0 | 4.20e-01 | 76.2% | 85.1% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.65 | 45.0 | 4.87e-01 | 84.1% | 95.8% |
| 3solA00 | 1.20.58.1630 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS | 0.64 | 49.0 | 4.42e-01 | 85.7% | 96.7% |
| 1c3cA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.62 | 44.0 | 4.09e-01 | 88.9% | 59.3% |
| 1zv1A00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.61 | 44.0 | 4.51e-01 | 100.0% | 84.7% |
| 1nxhA00 | 1.10.3070.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein MTH393 › EhaM-like | 0.60 | 48.0 | 4.00e-01 | 95.2% | 50.0% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.58 | 46.0 | 3.17e-01 | 90.5% | 36.8% |
| 1uqwA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.58 | 41.0 | 2.83e-01 | 76.2% | 71.1% |
| 1fc6A01 | 3.30.750.44 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.57 | 42.0 | 3.80e-01 | 84.1% | 56.1% |
| 2iqtA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 41.0 | 2.76e-01 | 90.5% | 85.8% |
| 7z67A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 38.0 | 2.62e-01 | 77.8% | 82.1% |
| 1mswD04 | 1.10.287.280 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 37.0 | 3.54e-01 | 77.8% | 64.1% |
| 7ob9B01 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.51 | 41.0 | 3.08e-01 | 96.8% | 53.1% |
| 3um7B01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 35.0 | 3.10e-01 | 71.4% | 70.1% |
| 4azsA03 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.50 | 41.0 | 3.23e-01 | 100.0% | 40.8% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3577880 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.73 | 50.0 | 4.50e-01 | 71.4% | 74.1% |
| 5023530 | 4957.1.1.0 ↗ | a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit | 0.68 | 56.0 | 5.77e-01 | 95.2% | 96.7% |
| 3277846 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.62 | 53.0 | 4.68e-01 | 100.0% | 68.0% |
| 4011571 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.59 | 46.0 | 4.48e-01 | 93.7% | 77.3% |
| 3219915 | 2485.1.1.49 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_12 | 0.57 | 42.0 | 3.18e-01 | 84.1% | 30.0% |
| 3679860 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.56 | 44.0 | 2.91e-01 | 90.5% | 33.3% |
| 5024245 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.56 | 36.0 | 3.02e-01 | 95.2% | 38.2% |
| 4318836 | 5065.1.1.3 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › BPD_transp_2 | 0.53 | 45.0 | 3.05e-01 | 100.0% | 28.5% |
| 1229038 | 206.1.1.73 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, APH | 0.50 | 41.0 | 2.84e-01 | 100.0% | 24.5% |