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EU849489.1__ACJ24727.1__X__00003

Bact-Vir

EU849489.1__ACJ24727.1__X__00003

Identity

Accession:
EU849489 ↗
Kingdom:
phage

Quality

79.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-72
PDB
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6hn7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 63.0 6.14e-01 78.8% 80.6%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.77 57.0 4.62e-01 80.3% 46.8%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.76 57.0 4.62e-01 80.3% 47.9%
4lhfA00 6.10.200.10 Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox 0.75 52.0 4.85e-01 71.2% 72.2%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.74 56.0 5.63e-01 80.3% 86.6%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.73 56.0 4.70e-01 83.3% 84.1%
3qaoA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.73 56.0 4.39e-01 83.3% 63.6%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.72 56.0 5.50e-01 84.8% 80.6%
1r8eA02 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.72 56.0 5.43e-01 84.8% 80.8%
3gp4B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.70 54.0 4.37e-01 84.8% 44.6%
5yc9B01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.69 51.0 4.51e-01 78.8% 53.6%
4b43A01 1.10.10.2480 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.66 51.0 5.10e-01 83.3% 86.8%
1vioA01 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.63 43.0 4.54e-01 71.2% 93.1%
2dt5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 42.0 4.09e-01 71.2% 63.0%
1kskA01 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.61 42.0 4.23e-01 71.2% 81.8%
3keoA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 40.0 3.97e-01 71.2% 63.9%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 40.0 3.93e-01 71.2% 72.2%
1gkuB06 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.58 49.0 3.81e-01 97.0% 46.2%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.57 45.0 3.18e-01 86.4% 82.9%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 38.0 3.76e-01 71.2% 69.9%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.43e-01 81.8% 94.6%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 3.38e-01 81.8% 42.3%
1i7dA02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.55 47.0 3.52e-01 100.0% 48.3%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 39.0 3.18e-01 78.8% 90.1%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 3.58e-01 75.8% 63.2%
2qm3A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 39.0 3.70e-01 80.3% 98.8%
2ek5B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.53e-01 84.8% 55.0%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.63e-01 71.2% 68.6%
3rjtA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.53 39.0 2.85e-01 81.8% 92.5%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 39.0 3.22e-01 80.3% 64.3%
3tduA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.52 40.0 3.71e-01 90.9% 65.6%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 39.0 3.14e-01 83.3% 42.1%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.52 36.0 3.82e-01 72.7% 80.0%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.38e-01 80.3% 60.2%
3fm5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.07e-01 80.3% 89.2%
4rg9B01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 35.0 2.60e-01 71.2% 50.3%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 38.0 3.08e-01 83.3% 60.9%
ECOD (67)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3587304 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.84 58.0 5.25e-01 71.2% 56.5%
4375315 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.82 56.0 6.37e-01 71.2% 96.0%
4191032 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.82 59.0 6.67e-01 75.8% 100.0%
4547937 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.81 59.0 6.28e-01 77.3% 93.1%
3960483 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.81 55.0 6.28e-01 71.2% 98.0%
4950846 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.80 57.0 6.43e-01 74.2% 100.0%
4974340 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.79 57.0 6.17e-01 74.2% 98.2%
3957229 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.79 56.0 5.92e-01 74.2% 93.3%
2168161 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.79 54.0 5.77e-01 71.2% 91.2%
4974775 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.78 54.0 5.65e-01 71.2% 83.3%
1710781 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.78 57.0 6.21e-01 77.3% 91.1%
3954117 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.77 60.0 5.49e-01 83.3% 68.2%
4087721 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.76 56.0 5.68e-01 80.3% 80.0%
3945289 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.76 56.0 4.57e-01 80.3% 47.2%
3289439 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.76 57.0 6.23e-01 81.8% 96.4%
3953197 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.75 59.0 5.19e-01 83.3% 61.1%
4994568 101.1.9.36 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.74 55.0 5.94e-01 81.8% 94.5%
4994828 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.73 52.0 5.17e-01 86.4% 71.4%
None 0.72 56.0 5.56e-01 84.8% 82.9%
3387406 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.72 55.0 4.80e-01 84.8% 55.2%
4682727 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.71 55.0 6.01e-01 83.3% 98.2%
3948248 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.71 52.0 5.31e-01 78.8% 92.3%
5007668 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.71 54.0 4.46e-01 84.8% 45.6%
3284505 101.1.9.36 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.70 54.0 4.51e-01 83.3% 50.4%
3280706 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.70 55.0 5.15e-01 84.8% 71.2%
2325046 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.70 54.0 4.49e-01 84.8% 49.2%
4057369 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.67 52.0 4.07e-01 83.3% 40.7%
4158216 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.67 52.0 5.42e-01 83.3% 93.3%
4309718 4008.1.1.0 0.66 40.0 4.54e-01 75.8% 86.7%
3278866 221.1.2.17 a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › DUF1062 0.66 47.0 4.91e-01 74.2% 91.7%
4251581 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.66 48.0 4.87e-01 78.8% 83.1%
4886263 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.66 47.0 5.07e-01 77.3% 94.5%
3385514 221.1.2.5 a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › S4 0.65 45.0 4.48e-01 72.7% 100.0%
3197805 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.65 39.0 3.85e-01 74.2% 55.7%
4046076 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.65 47.0 4.10e-01 78.8% 50.5%
3579672 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.65 46.0 4.93e-01 81.8% 89.1%
4210562 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.65 50.0 5.24e-01 83.3% 93.3%
4100614 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.65 48.0 5.16e-01 87.9% 94.5%
4456842 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.64 51.0 5.29e-01 84.8% 93.3%
4390858 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.64 45.0 5.03e-01 86.4% 98.0%
5003826 206.1.3.23 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RNA_ligase 0.64 44.0 2.94e-01 77.3% 18.8%
3664931 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.64 44.0 4.82e-01 81.8% 96.0%
4389062 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.63 46.0 4.80e-01 77.3% 86.7%
4633347 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.63 45.0 5.08e-01 81.8% 100.0%
4046332 101.1.2.81 alpha arrays › HTH › HTH › winged helix domain › Put_DNA-bind_N 0.63 44.0 4.23e-01 77.3% 62.5%
4507097 3601.1.1.1 alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Ad_Cy_reg 0.63 48.0 3.75e-01 86.4% 37.9%
2892669 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.62 43.0 3.96e-01 81.8% 54.5%
3366705 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.62 44.0 4.47e-01 81.8% 75.4%
4447894 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.62 43.0 4.58e-01 75.8% 87.3%
4310740 101.1.2.81 alpha arrays › HTH › HTH › winged helix domain › Put_DNA-bind_N 0.62 44.0 4.16e-01 77.3% 62.5%
4561443 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.61 48.0 5.02e-01 95.5% 96.7%
4467398 101.1.2.81 alpha arrays › HTH › HTH › winged helix domain › Put_DNA-bind_N 0.61 41.0 4.09e-01 72.7% 67.1%
3948669 101.1.9.26 alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like 0.60 50.0 4.10e-01 89.4% 67.8%
4064277 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.60 49.0 4.93e-01 89.4% 90.8%
4472807 101.1.9.8 alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N 0.59 48.0 4.54e-01 89.4% 73.8%
3511008 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.58 48.0 4.46e-01 100.0% 72.2%
3594470 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.56 40.0 3.69e-01 78.8% 57.8%
4933930 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.56 45.0 4.23e-01 89.4% 76.2%
4032282 101.1.4.29 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › DUF2316 0.55 39.0 3.52e-01 72.7% 77.6%
5083863 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 43.0 3.13e-01 89.4% 88.0%
4352407 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.54 40.0 3.93e-01 89.4% 75.7%
5053312 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 39.0 3.51e-01 80.3% 63.2%
4947238 604.39.1.0 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters 0.53 40.0 3.06e-01 87.9% 95.6%
3329707 101.1.2.396 alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 0.52 43.0 3.24e-01 98.5% 69.5%
3905927 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 42.0 4.07e-01 100.0% 84.0%
3825507 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 41.0 2.53e-01 98.5% 25.3%
3380408 207.1.1.230 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › WHD_ROQ1 0.50 41.0 2.76e-01 98.5% 34.2%
D2 high residues 139-213
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4mycA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.78 71.0 4.58e-01 100.0% 36.0%
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.77 60.0 6.36e-01 96.0% 96.9%
5svlA01 1.10.287.940 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › atp-gated p2x4 ion channel 0.76 57.0 5.98e-01 81.3% 91.2%
3besR03 6.10.140.1480 Special › Helix non-globular › Helix Hairpins › 0.76 47.0 5.26e-01 80.0% 83.9%
4oydB00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.73 61.0 5.29e-01 93.3% 67.5%
1dd5A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.72 62.0 5.49e-01 96.0% 67.9%
3tklB01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 47.0 5.14e-01 85.3% 80.6%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.71 56.0 4.61e-01 84.0% 47.4%
1v9mA01 1.10.132.50 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › ATP synthase (C/AC39) subunit, domain 3 0.70 50.0 4.36e-01 90.7% 49.6%
4kb2A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.69 61.0 5.44e-01 100.0% 71.6%
2cwqA00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.69 44.0 3.68e-01 80.0% 38.1%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.69 57.0 5.76e-01 96.0% 94.6%
1hwyA01 1.10.287.140 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.67 44.0 5.13e-01 73.3% 100.0%
2nn4A00 1.10.287.760 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like 0.67 38.0 4.11e-01 85.3% 66.1%
1qsdA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 47.0 4.26e-01 74.7% 54.9%
5dn6J00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.66 56.0 5.71e-01 96.0% 95.9%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.66 42.0 4.68e-01 82.7% 84.5%
3beyD00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.65 43.0 4.05e-01 72.0% 54.3%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 48.0 4.92e-01 80.0% 83.6%
2mpnA00 6.10.140.1340 Special › Helix non-globular › Helix Hairpins › 0.64 49.0 5.06e-01 96.0% 91.2%
3l9fA02 6.10.140.1570 Special › Helix non-globular › Helix Hairpins › 0.64 48.0 4.75e-01 84.0% 75.3%
4a4kA01 1.20.1500.20 Mainly Alpha › Up-down Bundle › YheA-like fold › 0.64 44.0 3.89e-01 81.3% 47.8%
4m52A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 53.0 3.85e-01 94.7% 44.6%
2fb5A01 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.63 49.0 5.02e-01 84.0% 91.7%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.63 50.0 5.02e-01 85.3% 85.3%
3r84A00 1.10.287.3490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 47.0 4.58e-01 84.0% 72.8%
1yg2A02 6.10.140.190 Special › Helix non-globular › Helix Hairpins › 0.62 46.0 4.34e-01 78.7% 73.3%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.62 47.0 4.87e-01 89.3% 84.5%
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.62 48.0 4.33e-01 84.0% 60.7%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.62 50.0 4.80e-01 88.0% 84.9%
3fxdB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 42.0 4.69e-01 89.3% 91.4%
3layF00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.62 54.0 5.33e-01 96.0% 93.6%
4huqS00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.62 44.0 3.47e-01 76.0% 34.8%
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 49.0 3.43e-01 85.3% 28.0%
1hciA04 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 47.0 4.12e-01 89.3% 54.4%
1t72A02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.61 50.0 4.61e-01 93.3% 69.4%
2y39A00 1.20.120.1490 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.61 52.0 4.66e-01 97.3% 73.6%
2yqyA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.61 48.0 4.10e-01 88.0% 82.5%
1vw4T01 6.10.330.20 Special › Helix non-globular › Monooxygenase › 0.60 47.0 4.12e-01 89.3% 56.2%
3b0cW00 1.10.20.10 Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A 0.60 42.0 4.28e-01 84.0% 76.7%
1gaxA05 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.59 46.0 4.66e-01 84.0% 86.3%
2wgmA01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.59 51.0 4.99e-01 100.0% 92.7%
4gf0A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.59 45.0 3.99e-01 84.0% 57.5%
4hr1A00 1.20.1270.410 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.58 47.0 4.11e-01 89.3% 64.4%
3fd9A03 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.58 43.0 4.37e-01 93.3% 79.5%
1qv9A02 6.10.140.120 Special › Helix non-globular › Helix Hairpins › 0.58 47.0 4.34e-01 93.3% 67.0%
4nb5B02 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.57 45.0 4.74e-01 93.3% 100.0%
4b3fX01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 43.0 2.85e-01 81.3% 20.9%
6xm1A02 3.90.830.10 Alpha Beta › Alpha-Beta Complex › Syntaxin Binding Protein 1; Chain A, domain 2 › Sec1/Munc18 (SM) protein, domain 3a 0.57 46.0 3.99e-01 86.7% 100.0%
1wa8A00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.56 47.0 4.36e-01 94.7% 75.8%
2rbdA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.54 45.0 3.70e-01 96.0% 80.7%
1b5lA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.54 46.0 3.62e-01 93.3% 98.0%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3882597 4009.1.1.0 alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.79 65.0 6.13e-01 89.3% 74.4%
3214018 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.78 59.0 5.44e-01 80.0% 68.4%
4025741 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.77 62.0 4.70e-01 94.7% 37.2%
1144608 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.75 62.0 5.50e-01 93.3% 62.3%
3735933 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.75 65.0 5.22e-01 96.0% 51.0%
5040229 5058.1.1.2 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st 0.75 63.0 5.74e-01 93.3% 72.0%
3696717 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.75 64.0 4.79e-01 96.0% 38.9%
3317016 150.5.1.102 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PF28483 0.75 61.0 6.40e-01 94.7% 100.0%
3386352 4207.1.1.104 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › Bac_export_2 0.74 66.0 5.82e-01 100.0% 68.2%
4933188 5069.1.3.1 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › Sdh_cyt 0.74 57.0 5.29e-01 86.7% 65.3%
3648733 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.74 60.0 4.35e-01 96.0% 31.9%
4956171 5069.1.3.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.73 55.0 5.18e-01 84.0% 65.3%
5017842 5058.1.1.0 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.73 60.0 5.78e-01 93.3% 80.0%
3595902 310.2.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF 0.73 62.0 4.59e-01 96.0% 38.0%
3784055 192.24.1.0 alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain 0.72 61.0 5.12e-01 93.3% 54.6%
4137468 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.72 62.0 4.63e-01 94.7% 77.8%
5035207 5058.1.1.0 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region 0.72 60.0 5.41e-01 93.3% 68.6%
3731914 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.72 62.0 5.07e-01 96.0% 53.6%
2326778 601.15.1.1 alpha bundles › Four-helical up-and-down bundle › Proteasome activator reg(alpha) › Proteasome activator reg(alpha) › PA28_N,PA28_C 0.72 60.0 4.25e-01 89.3% 77.3%
4988114 3646.1.1.1 alpha complex topology › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › T-component of energy-coupling factor (ECF) transporters › CbiQ 0.72 59.0 4.19e-01 92.0% 29.8%
4016091 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.71 60.0 5.79e-01 96.0% 83.5%
4015450 3843.1.1.0 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.70 55.0 5.65e-01 86.7% 90.0%
4988487 547.1.1.1 alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer 0.69 52.0 5.17e-01 81.3% 82.3%
4992050 5069.1.3.0 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.69 51.0 4.52e-01 84.0% 53.0%
4629385 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.69 54.0 4.30e-01 85.3% 90.7%
5030596 3826.1.1.0 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.68 54.0 5.67e-01 86.7% 100.0%
4157142 150.5.1.7 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › Mis12 0.68 59.0 5.15e-01 97.3% 79.1%
3972992 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.68 54.0 5.68e-01 93.3% 100.0%
3838083 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.67 48.0 4.99e-01 80.0% 81.4%
3410594 4177.1.1.6 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3_WASP_bdg 0.66 56.0 4.12e-01 96.0% 63.9%
4971062 192.15.1.0 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.65 47.0 4.56e-01 80.0% 68.2%
3973899 5086.1.1.92 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AprE 0.63 57.0 4.56e-01 100.0% 72.4%
3906467 1008.1.1.106 alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › CSN5_C 0.61 48.0 4.58e-01 86.7% 75.6%
4995305 604.5.1.2 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PhoU 0.61 47.0 4.39e-01 84.0% 66.3%
3879684 223.2.1.46 a+b three layers › Profilin-like › profilin-like › profilin-like › FNIP_N, FNIP_M 0.61 48.0 3.79e-01 88.0% 40.6%
3927398 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.61 52.0 4.75e-01 100.0% 82.9%
3705837 192.12.1.5 alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM › Cmc1 0.60 49.0 4.73e-01 89.3% 83.5%
4493879 4992.1.1.23 extended segments › RelB-like › RelB-like › RelB-like › Seryl_tRNA_N 0.60 48.0 4.19e-01 85.3% 60.0%
3287947 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.59 51.0 4.79e-01 94.7% 78.9%
4643578 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.59 48.0 4.11e-01 90.7% 61.6%
4138735 632.22.1.1 alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA 0.58 47.0 4.29e-01 88.0% 80.0%
3975851 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.57 48.0 4.95e-01 93.3% 100.0%
4979163 5059.1.1.1 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA 0.56 50.0 3.95e-01 98.7% 47.7%
4106620 605.1.1.1 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.55 46.0 4.66e-01 94.7% 96.0%
3780651 3602.1.1.0 alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain 0.55 43.0 4.61e-01 93.3% 100.0%