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Early_transcription_factor_VETFs
Euk-VirSheeppox_virus
Early_transcription_factor_VETFs__NP_659656__Sheeppox_virus__10266
Identity
- Accession:
- NP_659656 ↗
- Protein ID:
- Early_transcription_factor_VETFs
- Kingdom:
- euk
Quality
87.1
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Capripoxvirus›
Sheeppox_virus
TaxID: 10266
Cluster
View cluster (106 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 536-623
Domain cluster:
rep: morph,_VETF-s_early_transcription_factor_small__YP_008004589__Choristoneura_rosaceana_entomopoxvirus_L__1293539__D579-656
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fokA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 53.0 | 5.36e-01 | 87.5% | 77.0% |
| 5y6iA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 48.0 | 5.14e-01 | 87.5% | 90.4% |
| 1c0wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 46.0 | 4.90e-01 | 86.4% | 89.0% |
| 6qpqB00 | 1.10.10.580 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E | 0.63 | 49.0 | 5.10e-01 | 84.1% | 93.8% |
| 2pexA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 47.0 | 4.10e-01 | 87.5% | 52.2% |
| 1zarA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 45.0 | 4.58e-01 | 86.4% | 75.3% |
| 2ns0A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 50.0 | 5.13e-01 | 88.6% | 98.8% |
| 6az6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 47.0 | 5.05e-01 | 98.9% | 98.7% |
| 3bz6A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 47.0 | 4.97e-01 | 86.4% | 94.9% |
| 4zo2A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.61 | 49.0 | 3.46e-01 | 89.8% | 53.9% |
| 3by6C01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 43.0 | 4.58e-01 | 86.4% | 88.3% |
| 8amzT01 | 1.25.40.990 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.59 | 47.0 | 3.38e-01 | 94.3% | 29.2% |
| 2yhsA01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.58 | 41.0 | 4.05e-01 | 87.5% | 69.1% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.54 | 33.0 | 3.97e-01 | 90.9% | 96.4% |
| 5vt9B01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.54 | 34.0 | 3.67e-01 | 85.2% | 76.7% |
| 1r89A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.50 | 37.0 | 3.29e-01 | 86.4% | 53.9% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4025625 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 53.0 | 5.83e-01 | 86.4% | 94.2% |
| 4304583 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 52.0 | 5.89e-01 | 84.1% | 100.0% |
| 4969349 | 101.1.2.894 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2240 | 0.71 | 50.0 | 5.24e-01 | 85.2% | 81.2% |
| 4344708 | 101.1.2.311 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA12 | 0.71 | 51.0 | 5.01e-01 | 88.6% | 70.5% |
| 5021801 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 52.0 | 5.57e-01 | 87.5% | 92.0% |
| 3311291 | 101.1.2.377 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM5_C | 0.70 | 48.0 | 5.05e-01 | 84.1% | 78.8% |
| 5080760 | 101.1.2.894 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2240 | 0.70 | 49.0 | 4.96e-01 | 85.2% | 72.2% |
| 4967858 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 52.0 | 5.58e-01 | 88.6% | 93.3% |
| 5031460 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.69 | 51.0 | 5.14e-01 | 87.5% | 76.7% |
| 4037999 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.69 | 54.0 | 5.24e-01 | 86.4% | 75.8% |
| 5001614 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 55.0 | 5.62e-01 | 85.2% | 95.3% |
| 3666427 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.69 | 52.0 | 4.32e-01 | 87.5% | 45.8% |
| 3666424 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 55.0 | 4.91e-01 | 87.5% | 62.5% |
| 4999528 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 49.0 | 5.05e-01 | 84.1% | 78.8% |
| 3439642 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 54.0 | 4.63e-01 | 86.4% | 53.6% |
| 3422886 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.67 | 54.0 | 4.47e-01 | 86.4% | 50.0% |
| 5019807 | 101.1.2.894 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2240 | 0.67 | 48.0 | 4.04e-01 | 85.2% | 44.8% |
| 5050212 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 51.0 | 4.98e-01 | 88.6% | 74.7% |
| 5012106 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.67 | 49.0 | 4.30e-01 | 86.4% | 51.1% |
| 4027193 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 53.0 | 5.33e-01 | 86.4% | 86.7% |
| 4939871 | 101.1.2.896 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF2551 | 0.66 | 51.0 | 4.85e-01 | 89.8% | 69.5% |
| 5047202 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 46.0 | 5.01e-01 | 85.2% | 91.4% |
| 3670673 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.66 | 51.0 | 4.77e-01 | 87.5% | 66.4% |
| 3250041 | 101.1.2.525 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7646 | 0.66 | 54.0 | 3.94e-01 | 87.5% | 35.6% |
| 4980266 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 48.0 | 4.90e-01 | 85.2% | 80.0% |
| 4993297 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.64 | 47.0 | 4.72e-01 | 85.2% | 75.6% |
| 3181298 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 52.0 | 4.77e-01 | 87.5% | 67.0% |
| 5033725 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.63 | 49.0 | 5.00e-01 | 90.9% | 87.1% |
| 4546696 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.63 | 47.0 | 4.73e-01 | 87.5% | 78.9% |
| 3594111 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 50.0 | 5.07e-01 | 87.5% | 100.0% |
| 4665743 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 47.0 | 4.48e-01 | 86.4% | 67.6% |
| 3729903 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 46.0 | 5.00e-01 | 86.4% | 100.0% |
| 4983791 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.62 | 48.0 | 4.23e-01 | 86.4% | 56.9% |
| 3953113 | 101.1.2.246 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_PafC | 0.62 | 47.0 | 4.11e-01 | 87.5% | 54.6% |
| 4995062 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 47.0 | 4.69e-01 | 88.6% | 82.2% |
| 4967950 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 49.0 | 4.88e-01 | 88.6% | 88.9% |
| 3193620 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.60 | 48.0 | 3.02e-01 | 88.6% | 76.9% |
| 3502119 | 101.1.2.69 ↗ | alpha arrays › HTH › HTH › winged helix domain › La | 0.58 | 47.0 | 4.72e-01 | 88.6% | 92.2% |
| 3164764 | 2008.1.1.168 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF30184 | 0.58 | 45.0 | 4.61e-01 | 84.1% | 90.6% |
| 3872231 | 391.1.2.11 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_2nd | 0.58 | 30.0 | 3.60e-01 | 70.5% | 76.4% |
| 3255892 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.57 | 39.0 | 4.24e-01 | 76.1% | 88.6% |
| 3833809 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 44.0 | 4.34e-01 | 85.2% | 88.4% |
| 4028315 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.56 | 39.0 | 3.63e-01 | 79.5% | 56.4% |
| 4000007 | 108.1.1.146 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › PF30344 | 0.56 | 38.0 | 3.79e-01 | 79.5% | 66.3% |
| 5024565 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.54 | 48.0 | 4.19e-01 | 100.0% | 77.8% |
| 3271015 | 223.2.1.3 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s | 0.53 | 37.0 | 3.15e-01 | 72.7% | 74.7% |
| 3598217 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.53 | 34.0 | 3.47e-01 | 79.5% | 65.9% |
| 4962679 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.52 | 30.0 | 3.59e-01 | 79.5% | 90.9% |
| 3444225 | 108.1.1.28 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6,EF-hand_7 | 0.51 | 35.0 | 3.61e-01 | 80.7% | 72.9% |
| 3361063 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.51 | 42.0 | 3.09e-01 | 93.2% | 93.1% |
| 5029740 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 29.0 | 2.87e-01 | 70.5% | 51.6% |
| None | — | 0.50 | 40.0 | 3.17e-01 | 87.5% | 72.6% | |
| 3593450 | 101.17.1.4 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › HU-CCDC81_euk_2 | 0.50 | 39.0 | 3.13e-01 | 87.5% | 70.0% |
D2
medium
residues 40-183
Domain cluster:
rep: VETF__YP_009143419__Raccoonpox_virus__10256__D46-158
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04851.22 best | ResIII | 28.3 | 2.20e-06 | 90.3% | 78.7% |
D3
medium
residues 184-245_503-535
Domain cluster:
rep: putative_early_transcription_factor_small_subunit__YP_009001583__Anomala_cuprea_entomopoxvirus__62099__D191-235_553-575
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qniA01 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.54 | 34.0 | 2.74e-01 | 85.3% | 31.4% |
| 4hbzA00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.54 | 33.0 | 2.73e-01 | 84.2% | 33.1% |
D4
medium
residues 322-471
Domain cluster:
rep: Early_transcription_factor_small_subunit_-VETF-s-__YP_009408039__Eptesipox_virus__1329402__D226-250_324-490
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00271.38 best | Helicase_C | 28.8 | 1.70e-06 | 89.3% | 54.5% |