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Erv1_Alr_family

Euk-Vir

Chrysochromulina_ericina_virus

Erv1_Alr_family__YP_009173469__Chrysochromulina_ericina_virus__455364

Identity

Accession:
YP_009173469 ↗
Protein ID:
Erv1_Alr_family
Kingdom:
euk

Quality

68.4 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Chrysochromulina_ericina_virus

TaxID: 455364

Cluster

View cluster (24 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-128
PDB
Domain cluster: rep: Ervl-Alr_family_protein__YP_009342175__Lymphocystis_disease_virus_Sa__1898060__D32-125
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04777.19 best Evr1_Alr 65.6 5.90e-18 85.1% 96.8%
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3gwnA00 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.97 89.0 9.00e-01 94.7% 97.3%
1oqcA00 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.94 81.0 8.19e-01 92.1% 90.2%
3gwlA00 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.93 80.0 8.34e-01 94.7% 96.2%
1jr8A00 1.20.120.310 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain 0.91 80.0 8.33e-01 96.5% 98.1%
3llkA01 1.20.120.1960 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › QSOX sulfhydryl oxidase domain 0.66 49.0 5.17e-01 82.5% 89.8%
2a0uB01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.65 50.0 4.49e-01 86.8% 58.7%
3b9qA01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.63 43.0 4.78e-01 76.3% 89.9%
3u9jA00 1.20.120.520 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like 0.63 49.0 4.47e-01 83.3% 77.1%
1h6gA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.62 47.0 4.60e-01 80.7% 98.4%
3anwA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 34.0 3.51e-01 86.8% 56.6%
6vvoE02 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.60 43.0 4.55e-01 76.3% 85.9%
2g3kA00 1.20.120.1130 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Vps28 C-terminal domain 0.59 45.0 4.85e-01 82.5% 98.9%
6cy5A01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.58 40.0 4.36e-01 76.3% 89.9%
1dd5A01 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.58 39.0 4.04e-01 70.2% 100.0%
2js5A00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.56 35.0 4.23e-01 88.6% 98.6%
2wdqA03 1.20.58.100 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain 0.56 39.0 3.92e-01 71.1% 82.9%
3lvyE01 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.56 35.0 3.17e-01 89.5% 42.4%
6xxvC00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.55 38.0 3.89e-01 71.9% 96.4%
4m0mA04 1.20.1270.440 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.54 40.0 3.96e-01 76.3% 100.0%
1a22A00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.54 42.0 3.71e-01 86.0% 95.0%
2i88A00 1.10.490.30 Mainly Alpha › Orthogonal Bundle › Globin-like › Colicin 0.54 42.0 3.63e-01 82.5% 74.7%
5ib9A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.53 47.0 3.58e-01 100.0% 87.0%
3hd6A00 1.10.3430.10 Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains 0.53 45.0 3.16e-01 95.6% 40.4%
2olsA01 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.52 37.0 3.23e-01 73.7% 97.8%
6lcuA02 1.10.10.470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Maltooligosyl trehalose synthase; domain 4 0.52 34.0 3.55e-01 97.4% 71.4%
4ga4A01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.52 26.0 3.16e-01 82.5% 76.1%
1f5oA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 38.0 3.54e-01 95.6% 59.7%
3ccyA02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.51 39.0 3.61e-01 82.5% 81.0%
2x1dA02 1.10.10.2120 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.50 28.0 3.26e-01 75.4% 79.7%
4xaxB02 1.20.58.1290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain 0.50 40.0 4.28e-01 97.4% 100.0%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1840998 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.97 89.0 8.29e-01 94.7% 81.5%
3211559 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.95 82.0 7.53e-01 92.1% 73.2%
3345939 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.95 81.0 7.99e-01 92.1% 84.2%
54687 601.21.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase 0.93 81.0 8.21e-01 93.0% 91.1%
135564 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.93 80.0 8.34e-01 94.7% 96.2%
3596726 601.21.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase 0.91 80.0 8.03e-01 93.0% 90.4%
54681 601.21.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase 0.91 80.0 8.34e-01 97.4% 99.0%
4024775 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.90 79.0 7.39e-01 92.1% 77.0%
3701941 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.90 80.0 8.05e-01 93.0% 92.2%
3697926 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.88 84.0 7.38e-01 100.0% 96.2%
3742966 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.87 78.0 8.01e-01 97.4% 97.3%
3172977 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.87 82.0 7.77e-01 98.2% 96.2%
3742876 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.85 81.0 7.78e-01 100.0% 99.2%
4028825 601.21.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Evr1_Alr 0.81 68.0 6.99e-01 90.4% 91.8%
4182665 601.1.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › Vinculin 0.61 49.0 4.41e-01 86.8% 91.3%
5075237 601.28.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.60 43.0 4.79e-01 73.7% 100.0%
3988631 4973.1.1.0 ↗ alpha bundles › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core › helical domain in DNA primase DnaG catalytic core 0.58 31.0 3.72e-01 87.7% 77.3%
3950589 601.18.1.5 ↗ alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 › DUF4395 0.58 46.0 4.80e-01 86.0% 99.0%
4946973 206.1.3.3 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › PPDK_N 0.55 42.0 3.09e-01 81.6% 53.9%
5047897 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.55 32.0 3.65e-01 76.3% 77.6%
3546332 627.1.1.4 ↗ alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › PF26202 0.54 38.0 3.37e-01 74.6% 60.6%
4018302 604.1.1.93 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › TMD0_ABC 0.53 37.0 3.17e-01 71.1% 54.7%
4388445 5000.4.1.4 ↗ alpha arrays › Toxins' membrane translocation domains › delta-Endotoxin (insectocide), N-terminal domain › delta-Endotoxin (insectocide), N-terminal domain › PF28873 0.52 40.0 3.26e-01 82.5% 95.2%
5054180 3236.1.1.1 ↗ alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_Exchanger 0.51 41.0 2.87e-01 100.0% 26.3%