ExoN

Euk-Vir

Rabbit_coronavirus_HKU14

ExoN__YP_009924421__Rabbit_coronavirus_HKU14__1160968

Identity

85.8 mean pLDDT

Orthornavirae› Pisuviricota› Pisoniviricetes› Nidovirales› Coronaviridae› Betacoronavirus› Rabbit_coronavirus_HKU14

TaxID: 1160968

View cluster (23 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-53

PDB

D2 high residues 300-438_496-513

PDB

Domain cluster: rep: coronavirus_nsp11__NP_740631__Infectious_bronchitis_virus__11120__D299-519

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06471.20 best	CoV_ExoN	198.1	3.40e-58	89.8%	27.2%

D3 medium residues 68-89_157-293

PDB

Domain cluster: rep: 3_to_5_exonuclease__NP_828871__SARS_coronavirus_Tor2__227984__D65-287

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06471.20 best	CoV_ExoN	208.8	2.00e-61	86.8%	26.4%

D4 medium residues 90-156

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06471.20 best	CoV_ExoN	87.9	8.80e-25	100.0%	12.8%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4ok4A02	2.70.98.70	Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 ›	0.53	38.0	2.44e-01	100.0%	14.7%
7bj4A01	2.115.10.20	Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43	0.52	40.0	2.54e-01	85.1%	58.3%
8bddA02	2.70.98.70	Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 ›	0.50	40.0	2.64e-01	94.0%	60.6%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4882792	2003.1.5.57 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › CoV_ExoN	0.98	94.0	5.91e-01	100.0%	23.4%
3164479	3523.1.1.1 ↗	beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › LptF_LptG	0.51	37.0	3.38e-01	100.0%	55.8%
3714105	304.48.1.11 ↗	a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol	0.50	39.0	2.97e-01	91.0%	69.6%

D5 medium residues 439-495

PDB

Domain cluster: rep: 3_to_5_exonuclease__YP_009555255__Human_coronavirus_OC43__31631__D438-498

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06471.20 best	CoV_ExoN	66.7	2.30e-18	100.0%	10.1%