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F-box_containing_protein
Euk-VirMarseillevirus_marseillevirus
F-box_containing_protein__YP_003406793__Marseillevirus_marseillevirus__694581
Identity
- Accession:
- YP_003406793 ↗
- Protein ID:
- F-box_containing_protein
- Kingdom:
- euk
Quality
72.0
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Marseillevirus_marseillevirus
TaxID: 694581
Cluster
View cluster (36 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-63
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00646.39 best | F-box | 28.8 | 1.10e-06 | 69.5% | 88.4% |
| PF12937.13 | F-box-like | 35.8 | 7.70e-09 | 66.1% | 78.7% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ibkB00 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.83 | 57.0 | 6.32e-01 | 71.2% | 93.5% |
| 2ovrB01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.82 | 60.0 | 5.15e-01 | 76.3% | 64.4% |
| 3l2oB01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.81 | 59.0 | 5.05e-01 | 76.3% | 89.8% |
| 3v7dD01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.79 | 63.0 | 5.17e-01 | 84.7% | 82.0% |
| 3ogkB01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.76 | 50.0 | 5.78e-01 | 78.0% | 97.6% |
| 1fs2A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.76 | 56.0 | 3.60e-01 | 83.1% | 17.8% |
| 4by6B00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.66 | 48.0 | 3.53e-01 | 79.7% | 28.3% |
| 4kwaB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 45.0 | 3.13e-01 | 81.4% | 49.5% |
| 3qmvB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 39.0 | 2.67e-01 | 81.4% | 21.7% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3328883 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.98 | 64.0 | 5.65e-01 | 71.2% | 50.0% |
| 3924100 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.94 | 65.0 | 7.41e-01 | 71.2% | 93.3% |
| 3645833 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.92 | 61.0 | 7.25e-01 | 71.2% | 100.0% |
| 3231309 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.92 | 63.0 | 7.14e-01 | 71.2% | 95.6% |
| 3242274 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.91 | 60.0 | 5.48e-01 | 71.2% | 53.3% |
| 3239562 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.90 | 63.0 | 6.57e-01 | 72.9% | 78.2% |
| 3242739 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.89 | 65.0 | 7.00e-01 | 79.7% | 90.0% |
| 4021347 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.89 | 61.0 | 6.94e-01 | 71.2% | 93.3% |
| 3472074 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.89 | 63.0 | 5.28e-01 | 81.4% | 46.3% |
| 3854965 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.89 | 61.0 | 5.15e-01 | 71.2% | 91.1% |
| 3931145 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.88 | 58.0 | 6.92e-01 | 74.6% | 100.0% |
| 3194239 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.88 | 60.0 | 3.49e-01 | 71.2% | 9.7% |
| 3903969 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.87 | 61.0 | 5.21e-01 | 78.0% | 47.8% |
| 3644704 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.87 | 61.0 | 5.30e-01 | 81.4% | 50.6% |
| 3617289 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.87 | 58.0 | 5.81e-01 | 72.9% | 68.3% |
| 3211201 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.87 | 60.0 | 6.77e-01 | 78.0% | 95.6% |
| 3229045 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.86 | 61.0 | 5.05e-01 | 72.9% | 46.3% |
| 3734528 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.86 | 61.0 | 5.46e-01 | 78.0% | 55.0% |
| 3244362 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.86 | 59.0 | 6.57e-01 | 76.3% | 93.3% |
| 3242613 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.85 | 56.0 | 6.67e-01 | 71.2% | 100.0% |
| 4023099 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.85 | 60.0 | 4.70e-01 | 78.0% | 37.4% |
| 3482945 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.85 | 61.0 | 3.61e-01 | 76.3% | 11.5% |
| 3378759 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.85 | 59.0 | 6.66e-01 | 76.3% | 95.6% |
| 3244934 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.85 | 62.0 | 3.75e-01 | 76.3% | 13.7% |
| 3233144 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.85 | 58.0 | 4.26e-01 | 72.9% | 29.0% |
| 3215966 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.84 | 60.0 | 6.68e-01 | 79.7% | 97.8% |
| 4013644 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.84 | 58.0 | 4.94e-01 | 71.2% | 84.4% |
| 3529395 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.84 | 59.0 | 5.69e-01 | 72.9% | 66.2% |
| 3237758 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.83 | 54.0 | 6.29e-01 | 71.2% | 100.0% |
| 3402608 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.83 | 64.0 | 6.84e-01 | 94.9% | 98.0% |
| 3648014 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.82 | 56.0 | 5.16e-01 | 71.2% | 89.3% |
| 3228567 | 2484.1.1.162 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › F-box | 0.82 | 58.0 | 4.32e-01 | 78.0% | 31.4% |
| 3432900 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.82 | 60.0 | 6.72e-01 | 88.1% | 100.0% |
| 4203110 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.82 | 58.0 | 6.47e-01 | 76.3% | 97.8% |
| 3686440 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.81 | 58.0 | 5.18e-01 | 78.0% | 55.0% |
| 3239033 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.81 | 57.0 | 6.16e-01 | 78.0% | 88.0% |
| 1807269 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.81 | 58.0 | 6.33e-01 | 76.3% | 91.7% |
| 3184253 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.80 | 56.0 | 6.29e-01 | 72.9% | 95.6% |
| 3741846 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.80 | 59.0 | 4.88e-01 | 78.0% | 83.0% |
| 4500280 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.79 | 59.0 | 5.15e-01 | 78.0% | 78.8% |
| 4040935 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.79 | 59.0 | 4.64e-01 | 78.0% | 87.0% |
| 3173927 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.79 | 56.0 | 6.24e-01 | 76.3% | 97.8% |
| 4011251 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.78 | 58.0 | 3.79e-01 | 78.0% | 31.5% |
| 3739781 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.78 | 61.0 | 3.48e-01 | 83.1% | 14.3% |
| 3183752 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.78 | 54.0 | 6.11e-01 | 74.6% | 95.6% |
| 3331704 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.76 | 53.0 | 5.71e-01 | 76.3% | 88.0% |
| 3235480 | 3727.1.1.0 ↗ | alpha arrays › Hsc70-interacting protein dimerization domain › Hsc70-interacting protein dimerization domain › Hsc70-interacting protein dimerization domain | 0.74 | 55.0 | 5.07e-01 | 84.7% | 62.7% |
| 3726578 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.74 | 59.0 | 5.14e-01 | 84.7% | 87.1% |
| 3693613 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.71 | 63.0 | 3.61e-01 | 100.0% | 16.7% |
D2
medium
residues 108-238