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F-box_domain
Euk-VirPandoravirus_salinus
F-box_domain__YP_008437633__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008437633 ↗
- Protein ID:
- F-box_domain
- Kingdom:
- euk
Quality
70.0
mean pLDDT
Cluster
View cluster (14 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 430-531
D2
medium
residues 11-80
D3
medium
residues 142-252
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5cl3A00 | 1.25.10.90 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › | 0.60 | 53.0 | 4.25e-01 | 100.0% | 92.2% |
| 2ouxA01 | 1.25.60.10 | Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like | 0.57 | 51.0 | 4.88e-01 | 100.0% | 86.7% |
| 3e53A00 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.57 | 43.0 | 2.92e-01 | 79.3% | 24.5% |
| 2b8tA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 44.0 | 4.07e-01 | 84.7% | 74.8% |
| 8amzT01 | 1.25.40.990 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 43.0 | 3.37e-01 | 87.4% | 45.1% |
| 6bk0A01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 42.0 | 3.24e-01 | 83.8% | 56.0% |
| 6kvrA01 | 3.90.1300.10 | Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain | 0.53 | 45.0 | 2.95e-01 | 97.3% | 92.2% |
| 4l0cA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 45.0 | 3.56e-01 | 98.2% | 88.2% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 42.0 | 3.69e-01 | 91.0% | 79.6% |
| 4psuA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 45.0 | 3.42e-01 | 98.2% | 82.2% |
| 1u2eA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 44.0 | 3.38e-01 | 98.2% | 85.3% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3599811 | 109.3.1.33 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_3 | 0.74 | 54.0 | 5.09e-01 | 76.6% | 73.3% |
| 3257617 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.73 | 67.0 | 4.41e-01 | 100.0% | 30.9% |
| 3377825 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.69 | 55.0 | 5.07e-01 | 84.7% | 87.9% |
| 3627374 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.67 | 46.0 | 4.29e-01 | 70.3% | 98.5% |
| 3419001 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.66 | 60.0 | 5.26e-01 | 99.1% | 83.1% |
| 1156163 | 109.3.1.10 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_4 | 0.66 | 52.0 | 4.98e-01 | 83.8% | 85.6% |
| 3897537 | 109.3.1.340 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_3, Ank_4, Ank_5 | 0.65 | 59.0 | 5.11e-01 | 100.0% | 69.4% |
| 3562944 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.64 | 59.0 | 3.90e-01 | 100.0% | 27.8% |
| 3575751 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.64 | 55.0 | 5.13e-01 | 94.6% | 85.0% |
| 3171864 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 56.0 | 3.68e-01 | 100.0% | 26.7% |
| 4289174 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.63 | 57.0 | 5.06e-01 | 100.0% | 72.5% |
| 3497223 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 55.0 | 4.32e-01 | 100.0% | 60.8% |
| 3474354 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.63 | 52.0 | 4.90e-01 | 90.1% | 82.2% |
| 3929678 | 109.54.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 | 0.62 | 50.0 | 4.95e-01 | 87.4% | 96.5% |
| 3722746 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.61 | 54.0 | 4.96e-01 | 100.0% | 86.0% |
| 3978663 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.60 | 51.0 | 3.55e-01 | 94.6% | 40.5% |
| 3789584 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.59 | 53.0 | 4.22e-01 | 99.1% | 62.2% |
| 3335707 | 109.4.1.173 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NatA_aux_su | 0.57 | 41.0 | 3.34e-01 | 74.8% | 56.8% |
| 3250143 | 109.3.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank | 0.56 | 50.0 | 3.48e-01 | 100.0% | 41.3% |
| 3992850 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.54 | 42.0 | 4.37e-01 | 90.1% | 90.0% |
| 4170987 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 44.0 | 3.99e-01 | 100.0% | 89.7% |
D4
medium
residues 253-366