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F-box_domain

Euk-Vir

Pandoravirus_salinus

F-box_domain__YP_008437786__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008437786 ↗
Protein ID:
F-box_domain
Kingdom:
euk

Quality

85.7 mean pLDDT

Taxonomy

TaxID: 1349410

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 425-504
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6jd6B00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.87 79.0 5.77e-01 96.2% 45.8%
4uucA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.87 78.0 5.50e-01 96.2% 39.4%
1iknD00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.86 77.0 5.51e-01 96.2% 44.2%
1k1aA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.86 77.0 5.39e-01 96.2% 40.8%
1wdyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.85 77.0 5.09e-01 96.2% 30.9%
4bszB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.85 76.0 6.06e-01 96.2% 66.0%
4hi8A00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.85 76.0 5.82e-01 96.2% 51.8%
5eidA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.85 78.0 6.63e-01 98.8% 71.5%
4rlyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.85 75.0 4.95e-01 96.2% 28.6%
3utmA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.85 75.0 6.30e-01 96.2% 69.5%
1ympA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.85 75.0 6.30e-01 96.2% 67.2%
3eu9C00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.84 75.0 5.31e-01 96.2% 39.4%
2ajaA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.84 74.0 4.77e-01 96.2% 25.9%
5cecB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.83 74.0 5.47e-01 96.2% 46.1%
2rfmB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.83 74.0 5.55e-01 97.5% 48.4%
1qymA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.82 75.0 5.32e-01 98.8% 39.9%
4hbdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.82 74.0 5.13e-01 97.5% 36.3%
1n11A00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.82 75.0 4.67e-01 98.8% 21.8%
3deoA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.82 73.0 5.89e-01 96.2% 60.3%
6ghmC01 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.82 73.0 6.05e-01 96.2% 65.7%
3keaA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.82 75.0 5.02e-01 100.0% 32.5%
3uxgA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.81 72.0 5.62e-01 96.2% 54.0%
3ehrA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.81 71.0 6.26e-01 96.2% 76.7%
1ihbA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.80 72.0 5.75e-01 98.8% 56.4%
5ja4D00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.80 73.0 5.90e-01 100.0% 61.1%
1s70B02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.80 73.0 6.16e-01 100.0% 67.4%
3twqA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.80 72.0 5.61e-01 98.8% 53.7%
5z2mB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.79 71.0 5.91e-01 98.8% 71.5%
2f8xK00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.79 72.0 5.19e-01 100.0% 40.8%
2dznA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.79 72.0 5.11e-01 100.0% 39.8%
4me2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.67 57.0 4.43e-01 100.0% 61.9%
2kbwA01 1.10.437.10 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like 0.66 45.0 3.63e-01 70.0% 45.1%
1udyA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.65 44.0 3.89e-01 71.2% 78.3%
4xvxA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.64 43.0 3.92e-01 70.0% 77.5%
4k51B00 1.25.40.860 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.57 41.0 3.40e-01 77.5% 56.0%
2katA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 47.0 4.30e-01 96.2% 73.9%
2bwjA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 47.0 3.66e-01 100.0% 68.4%
2r5uC00 1.10.860.10 Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A 0.55 38.0 3.17e-01 72.5% 79.7%
3vovA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 44.0 3.65e-01 91.3% 72.7%
1hh8A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 43.0 3.45e-01 96.2% 52.1%
2lxlA00 1.25.40.270 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 0.52 37.0 3.03e-01 76.2% 77.9%
5is2A03 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.51 43.0 3.18e-01 95.0% 85.5%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3370231 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.87 79.0 6.67e-01 96.2% 71.0%
4572420 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.87 79.0 5.06e-01 96.2% 29.8%
3619592 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.87 77.0 5.09e-01 93.8% 28.3%
3501732 109.3.1.1 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank 0.86 78.0 5.99e-01 96.2% 52.7%
3277019 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.86 78.0 5.33e-01 97.5% 33.3%
4306725 109.3.1.20 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 0.85 79.0 5.37e-01 100.0% 33.8%
3259472 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.85 77.0 6.57e-01 100.0% 63.2%
3267273 109.3.1.8 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.85 76.0 6.68e-01 97.5% 70.4%
3224280 109.3.1.200 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, TRP_2, Ank_4 0.83 74.0 5.39e-01 96.2% 48.8%
3272965 109.3.1.8 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.83 73.0 6.64e-01 96.2% 72.4%
3247851 109.3.1.33 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_3 0.83 75.0 5.91e-01 98.8% 50.0%
3197410 109.3.1.96 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.83 76.0 4.69e-01 100.0% 21.4%
4001612 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.83 75.0 5.89e-01 98.8% 52.5%
3394472 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.83 75.0 5.53e-01 100.0% 44.5%
3171227 109.3.1.20 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 0.82 75.0 5.37e-01 100.0% 43.6%
3190075 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.82 75.0 4.79e-01 98.8% 25.8%
3724031 109.3.1.8 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.82 75.0 5.30e-01 100.0% 40.0%
3384016 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.81 75.0 5.05e-01 100.0% 34.5%
3260809 109.3.1.8 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.81 73.0 6.04e-01 98.8% 57.8%
3695738 109.3.1.232 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_KRIT1 0.81 74.0 4.62e-01 100.0% 32.1%
3288019 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.80 71.0 4.32e-01 96.2% 23.9%
3253180 109.3.1.171 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 0.80 71.0 5.13e-01 96.2% 54.9%
3267275 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.80 72.0 5.42e-01 100.0% 42.7%
3506356 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.80 74.0 5.20e-01 100.0% 40.0%
3275448 109.3.1.171 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 0.80 68.0 4.94e-01 92.5% 41.9%
3883652 109.3.1.100 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+TRP_2+Ank_2 0.79 72.0 4.94e-01 100.0% 33.1%
3248235 109.3.1.189 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF28996 0.79 70.0 5.96e-01 96.2% 69.6%
3528655 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.79 73.0 5.60e-01 100.0% 50.6%
4019164 109.3.1.218 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_KRIT1 0.79 72.0 5.41e-01 100.0% 47.6%
4021542 109.3.1.2 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.78 71.0 4.21e-01 100.0% 16.7%
3253587 109.3.1.171 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 0.78 69.0 5.77e-01 95.0% 71.5%
3248202 109.3.1.10 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_4 0.78 69.0 5.35e-01 98.8% 46.9%
3512138 109.3.1.1 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank 0.75 67.0 5.83e-01 98.8% 72.5%
3382990 109.3.1.188 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF28568 0.74 66.0 4.47e-01 100.0% 62.4%
3254410 109.3.1.10 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_4 0.73 65.0 5.60e-01 98.8% 64.8%
3262021 109.3.1.171 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 0.71 62.0 4.86e-01 96.2% 52.9%
3316857 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.70 62.0 4.66e-01 100.0% 45.5%
3218817 109.4.1.958 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Vps41 0.69 60.0 3.82e-01 100.0% 23.5%
3518511 109.4.1.12 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Clathrin 0.68 56.0 4.52e-01 96.2% 47.3%
3307567 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.68 60.0 3.99e-01 100.0% 26.2%
4584852 109.4.1.923 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › AEP1 0.66 59.0 4.55e-01 100.0% 62.2%
3439934 109.4.1.958 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Vps41 0.66 58.0 3.89e-01 96.2% 35.9%
3338685 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.65 55.0 3.83e-01 96.2% 31.9%
3442305 109.4.1.1330 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_3, PPR_long 0.64 56.0 3.62e-01 100.0% 23.0%
3585502 109.4.1.72 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C 0.64 57.0 3.56e-01 100.0% 20.2%
3809505 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.63 55.0 3.96e-01 100.0% 37.2%
3818260 109.4.1.1274 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long 0.63 55.0 4.66e-01 100.0% 66.4%
3829197 109.4.1.1305 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long, TPR_24 0.63 54.0 3.78e-01 100.0% 32.5%
3827142 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.63 56.0 3.45e-01 100.0% 18.4%
3629713 109.4.1.1140 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_PEP5_VPS11 0.63 54.0 3.39e-01 96.2% 22.0%
3431692 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.62 53.0 4.34e-01 100.0% 56.4%
3299887 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.62 52.0 4.58e-01 93.8% 70.8%
3383477 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.62 53.0 4.40e-01 100.0% 59.4%
3676413 109.4.1.1260 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long 0.62 52.0 3.94e-01 100.0% 44.9%
3334414 109.4.1.1254 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.61 52.0 3.49e-01 100.0% 23.3%
3438912 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.61 52.0 3.78e-01 100.0% 37.6%
3421106 109.4.1.883 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.61 53.0 3.16e-01 100.0% 13.5%
3824817 109.4.1.1257 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 0.61 54.0 5.02e-01 100.0% 85.0%
3340216 109.4.1.1330 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_3, PPR_long 0.61 51.0 3.87e-01 100.0% 44.4%
3652373 109.4.1.420 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.61 52.0 3.89e-01 100.0% 42.7%
3699429 109.4.1.72 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps16_C 0.59 50.0 3.97e-01 96.2% 44.7%