←Back to structures

F-box_domain

Euk-Vir

Pandoravirus_salinus

F-box_domain__YP_008438289__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008438289 ↗
Protein ID:
F-box_domain
Kingdom:
euk

Quality

70.7 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (16 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 89-137
PDB
Domain cluster: rep: F-box_domain_containing_protein__YP_009482610__Pandoravirus_neocaledonia__2107708__D12-61
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12937.13 best F-box-like 37.0 3.20e-09 87.8% 91.5%
D2 medium residues 184-237
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5h0pA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.62 46.0 3.81e-01 81.5% 93.1%
4htlA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 35.0 2.94e-01 72.2% 31.0%
1a41A01 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.60 44.0 3.42e-01 100.0% 34.6%
3t6pA02 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.57 40.0 3.86e-01 77.8% 68.2%
5nckA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 34.0 2.80e-01 72.2% 29.5%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.56 39.0 4.07e-01 94.4% 83.3%
4nkpA01 3.30.450.150 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain 0.56 45.0 3.59e-01 98.1% 72.3%
2gupA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 34.0 2.84e-01 72.2% 32.0%
6urtA02 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 42.0 3.61e-01 83.3% 86.4%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.55 34.0 3.23e-01 70.4% 50.0%
6iw6B01 1.10.1410.10 Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › 0.55 42.0 2.95e-01 92.6% 79.8%
4gniA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.54 46.0 4.03e-01 100.0% 72.1%
6vq6H01 1.10.287.3240 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 37.0 2.48e-01 70.4% 43.6%
5fkaC02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 35.0 3.13e-01 98.1% 46.3%
2ap1A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 37.0 2.87e-01 75.9% 93.5%
2lmcB00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 37.0 3.59e-01 100.0% 67.2%
1ez0A02 3.40.309.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 0.52 43.0 3.10e-01 98.1% 56.8%
1k8kA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.51 43.0 3.73e-01 100.0% 69.6%
4r9iA01 3.30.497.10 Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 0.50 41.0 2.69e-01 92.6% 98.6%
2dnlA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.50 43.0 3.72e-01 100.0% 96.6%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4030530 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.66 45.0 3.57e-01 100.0% 32.5%
3728626 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.59 41.0 3.18e-01 74.1% 45.8%
3472961 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 46.0 3.55e-01 100.0% 35.3%
3258441 234.3.1.0 ↗ a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain 0.58 43.0 3.86e-01 79.6% 62.7%
4933528 3926.1.1.1 ↗ alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.58 49.0 3.33e-01 100.0% 36.2%
3588046 304.55.1.14 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Y2_Tnp 0.57 41.0 2.74e-01 79.6% 76.9%
4930161 242.4.1.2 ↗ a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central 0.57 48.0 3.90e-01 98.1% 60.9%
4590367 242.4.1.2 ↗ a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central 0.57 48.0 3.92e-01 100.0% 66.4%
5060010 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 40.0 4.30e-01 94.4% 91.1%
3459002 874.1.1.0 ↗ a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain 0.55 41.0 2.89e-01 85.2% 65.6%
3694127 70.3.1.1 ↗ beta barrels › beta-clip › SET domain-like › SET domain-like › SET 0.53 40.0 2.56e-01 81.5% 25.9%
3666939 2004.1.1.45 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MutS_V 0.53 42.0 2.37e-01 88.9% 59.9%
4027694 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.52 33.0 3.58e-01 77.8% 80.0%
5027448 312.1.1.0 ↗ a+b three layers › HIT-like › HIT-related › HIT-related 0.51 41.0 3.00e-01 90.7% 41.3%
3544606 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.51 40.0 2.60e-01 88.9% 49.6%
5012208 330.7.1.2 ↗ a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.51 36.0 3.15e-01 100.0% 46.7%
3986356 304.55.1.14 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Y2_Tnp 0.51 42.0 2.76e-01 100.0% 46.8%
3968891 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.51 39.0 3.18e-01 87.0% 81.8%
3470912 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.50 37.0 2.98e-01 94.4% 37.5%
D3 medium residues 238-344
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1lshB00 2.20.90.10 Mainly Beta › Single Sheet › Lipovitellin-phosvitin complex; beta-sheet shell regions › Vitellinogen, beta-sheet shell domain 0.76 67.0 5.63e-01 94.4% 87.4%
3sy9C01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.69 60.0 4.14e-01 94.4% 62.9%
4bboA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.66 51.0 5.02e-01 81.3% 81.4%
2i0oA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.63 48.0 3.57e-01 82.2% 76.7%
1h54B01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.63 51.0 3.78e-01 86.9% 92.2%
1v7wA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.61 51.0 3.65e-01 88.8% 93.4%
3nqhA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 42.0 3.10e-01 72.0% 43.2%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.60 52.0 4.88e-01 94.4% 90.1%
8bddA02 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.60 49.0 3.45e-01 90.7% 89.2%
1s4uX00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 52.0 3.65e-01 97.2% 46.9%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 46.0 3.99e-01 82.2% 66.1%
2d73A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.59 46.0 3.38e-01 82.2% 70.8%
1u17A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 44.0 3.64e-01 77.6% 60.5%
1nqnA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.59 45.0 4.37e-01 81.3% 81.4%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.58 42.0 4.23e-01 73.8% 84.9%
4xmeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 42.0 3.55e-01 75.7% 48.4%
2pcsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 46.0 4.08e-01 83.2% 77.6%
6x05A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 50.0 3.50e-01 98.1% 63.9%
3hdjA01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.58 40.0 3.74e-01 72.0% 80.0%
2ns9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 45.0 4.02e-01 82.2% 63.5%
1lkeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 40.0 3.50e-01 72.0% 49.7%
6jhpA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.56 48.0 3.49e-01 92.5% 96.6%
6phxA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.56 49.0 3.48e-01 93.5% 97.0%
2eabB01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.55 48.0 3.69e-01 95.3% 84.3%
2xn1A01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.55 48.0 3.47e-01 95.3% 98.1%
3jb9K01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 47.0 3.46e-01 94.4% 50.5%
5ov3B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 47.0 3.48e-01 97.2% 50.5%
1z94B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 42.0 3.83e-01 83.2% 61.5%
2yfoA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.54 45.0 3.30e-01 91.6% 58.1%
3w9aA00 2.60.120.1160 Mainly Beta › Sandwich › Jelly Rolls › 0.54 44.0 3.47e-01 89.7% 57.4%
8f5pE01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 46.0 3.19e-01 95.3% 52.5%
3dcdA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 40.0 2.95e-01 79.4% 69.6%
1ygaA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.54 45.0 3.20e-01 91.6% 66.7%
1yq2A05 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 43.0 3.08e-01 86.0% 65.0%
7wffb01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 46.0 3.39e-01 100.0% 93.7%
4ufcA01 2.70.98.50 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › putative glycoside hydrolase family protein from bacillus halodurans 0.52 45.0 3.18e-01 95.3% 60.2%
4wfvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 39.0 3.47e-01 79.4% 95.4%
2oq8A00 2.60.40.2930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 39.0 3.51e-01 81.3% 100.0%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4027722 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.73 61.0 5.78e-01 94.4% 76.8%
4024499 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.72 60.0 5.35e-01 94.4% 63.3%
3943894 77.1.1.7 ↗ beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › DUF1481 0.72 57.0 5.37e-01 85.0% 70.4%
3917130 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.70 55.0 4.27e-01 82.2% 54.5%
3581297 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.70 61.0 4.78e-01 93.5% 52.6%
4023996 331.3.1.6 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.69 54.0 4.49e-01 82.2% 66.7%
3453150 331.3.1.6 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.68 53.0 4.30e-01 81.3% 67.7%
4028624 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.68 59.0 4.33e-01 96.3% 36.9%
3559952 71.2.1.4 ↗ beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N 0.67 55.0 4.22e-01 87.9% 61.3%
3181792 331.3.1.6 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.67 53.0 4.26e-01 83.2% 63.5%
3229636 331.3.1.6 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.67 52.0 4.31e-01 82.2% 63.8%
3270444 331.3.1.6 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.67 52.0 4.34e-01 82.2% 65.6%
3600402 77.2.1.0 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.66 57.0 3.84e-01 95.3% 25.4%
3642603 5084.5.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 0.64 55.0 4.04e-01 96.3% 43.6%
3461283 77.1.1.8 ↗ beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › PF28611 0.63 53.0 5.51e-01 88.8% 100.0%
3490071 71.2.1.4 ↗ beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N 0.63 54.0 4.20e-01 94.4% 48.9%
5047323 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.62 48.0 3.65e-01 82.2% 72.5%
5035188 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.62 45.0 4.38e-01 82.2% 68.6%
4199183 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.58 46.0 4.21e-01 86.0% 67.6%
3988719 12.3.1.21 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hyd_65N_2 0.58 50.0 3.81e-01 94.4% 97.2%
3506414 12.3.1.42 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › DUF2152 0.57 47.0 3.74e-01 88.8% 86.7%
4160166 222.1.1.17 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.57 39.0 3.53e-01 70.1% 96.6%
3185606 12.3.1.21 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hyd_65N_2 0.57 43.0 3.27e-01 80.4% 82.3%
3731790 12.3.1.21 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hyd_65N_2 0.56 49.0 3.57e-01 93.5% 88.6%
4857362 12.3.1.25 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N 0.56 48.0 3.41e-01 92.5% 92.6%
1498212 12.3.1.21 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hyd_65N_2 0.56 49.0 3.58e-01 95.3% 93.4%
1031043 12.3.1.21 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hyd_65N_2 0.56 48.0 3.68e-01 94.4% 99.6%
4880457 12.3.1.22 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GH97_N 0.56 47.0 3.47e-01 89.7% 67.5%
3367314 5.1.4.510 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FBA_1 0.56 48.0 3.60e-01 97.2% 55.4%
None — 0.56 45.0 3.30e-01 86.9% 87.5%
5041783 4252.1.1.0 ↗ beta barrels › AttH-like › AttH-like › AttH-like 0.56 46.0 3.75e-01 90.7% 84.4%
1148155 12.3.1.25 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N 0.55 48.0 3.43e-01 95.3% 94.4%
4621250 12.3.1.25 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N 0.55 48.0 3.45e-01 95.3% 95.9%
3040855 12.3.1.21 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hyd_65N_2 0.55 48.0 3.69e-01 95.3% 97.9%
4642457 12.3.1.50 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › PF28395 0.55 47.0 3.36e-01 94.4% 88.0%
3416676 301.7.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like 0.55 43.0 3.93e-01 84.1% 89.7%
4186209 12.3.1.24 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.55 45.0 3.39e-01 89.7% 91.9%
4991694 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 42.0 3.04e-01 83.2% 37.7%
1565212 12.3.1.21 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hyd_65N_2 0.54 49.0 3.81e-01 100.0% 99.6%
1385068 12.3.1.25 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N 0.54 45.0 3.27e-01 91.6% 55.9%
4466055 12.3.1.25 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N 0.53 44.0 3.21e-01 91.6% 56.2%
3265153 4252.1.1.10 ↗ beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 0.53 43.0 3.40e-01 91.6% 68.6%
5056389 12.3.1.74 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › GDE_N 0.52 45.0 3.40e-01 94.4% 95.0%
5070518 331.9.1.0 ↗ a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.52 41.0 3.80e-01 84.1% 97.0%
1290096 2004.1.1.199 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B 0.51 40.0 3.34e-01 83.2% 61.1%
D4 medium residues 345-411
PDB
Domain cluster: rep: F-box_domain__YP_008438249__Pandoravirus_salinus__1349410__D282-354