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F-box_domain_containing_protein
Euk-VirPandoravirus_dulcis
F-box_domain_containing_protein__YP_008319488__Pandoravirus_dulcis__1349409
Identity
- Accession:
- YP_008319488 ↗
- Protein ID:
- F-box_domain_containing_protein
- Kingdom:
- euk
Quality
72.1
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 100-228_251-261
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2joxA00 | 2.60.40.4240 | Mainly Beta › Sandwich › Immunoglobulin-like › Transcription activator, Churchill | 0.63 | 36.0 | 4.09e-01 | 80.7% | 73.6% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4308299 | 77.3.1.3 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN | 0.74 | 52.0 | 5.15e-01 | 76.4% | 69.0% |
| 3614805 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.73 | 48.0 | 3.81e-01 | 76.4% | 35.8% |
| 4030599 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.67 | 52.0 | 5.21e-01 | 82.9% | 78.3% |
| 3992499 | 1100.1.1.1 ↗ | beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein › TIP41 | 0.59 | 45.0 | 3.71e-01 | 77.9% | 69.4% |
| 3928712 | 1100.1.1.1 ↗ | beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein › TIP41 | 0.59 | 45.0 | 3.63e-01 | 77.9% | 68.4% |
| 3396841 | 1100.1.1.1 ↗ | beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein › TIP41 | 0.57 | 44.0 | 3.67e-01 | 80.0% | 74.8% |
| 4466226 | 5087.1.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 › Vit_b-sht_shell | 0.55 | 37.0 | 4.31e-01 | 70.0% | 95.2% |
| 3502994 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.54 | 37.0 | 3.89e-01 | 80.7% | 74.6% |
| 3456597 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.52 | 35.0 | 3.31e-01 | 73.6% | 57.1% |
| 3334507 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 36.0 | 2.86e-01 | 73.6% | 93.9% |
| 4030396 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.50 | 37.0 | 3.84e-01 | 85.0% | 82.3% |
D2
medium
residues 439-539