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F-box_domain_containing_protein

Euk-Vir

Pandoravirus_macleodensis

F-box_domain_containing_protein__YP_009480897__Pandoravirus_macleodensis__2107707

Identity

Accession:
YP_009480897 ↗
Protein ID:
F-box_domain_containing_protein
Kingdom:
euk

Quality

53.6 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_macleodensis

TaxID: 2107707

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 110-168
PDB
Domain cluster: rep: F-box_incomplete_domain_containing_protein__YP_008318724__Pandoravirus_dulcis__1349409__D16-76
D2 medium residues 315-432
PDB
Domain cluster: rep: hypothetical_protein_TW95_gp1472__YP_009120441__Pandoravirus_inopinatum__1605721__D295-391
D3 medium residues 433-491_579-589
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3v0aB02 1.20.1120.10 Mainly Alpha › Up-down Bundle › "Clostridium botulinum neurotoxin B, ""coiled-coil"" domain" › "Clostridium botulinum neurotoxin b, ""coiled-coil"" domain" 0.66 49.0 3.16e-01 80.0% 50.8%
4hi8A00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.62 56.0 4.18e-01 100.0% 47.1%
1qymA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.62 56.0 3.89e-01 100.0% 35.9%
4gyvE00 1.20.900.10 Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain 0.57 47.0 3.37e-01 92.9% 66.0%
1c17M00 1.20.120.220 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ATP synthase, F0 complex, subunit A 0.51 42.0 3.36e-01 91.4% 58.5%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3866533 109.3.1.164 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.68 62.0 4.31e-01 100.0% 52.1%
3775252 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.66 59.0 3.77e-01 100.0% 32.4%
3681248 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.65 59.0 4.07e-01 100.0% 41.3%
3599805 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.63 48.0 3.65e-01 81.4% 36.3%
3880919 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.63 45.0 3.60e-01 77.1% 80.4%
3993024 109.3.1.165 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4, Ank_5 0.62 55.0 4.14e-01 100.0% 47.1%
3457403 633.4.1.1 ↗ alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.57 40.0 3.38e-01 75.7% 56.9%
D4 medium residues 566-578_590-658_675-735_754-806
PDB
D5 medium residues 807-876
PDB