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F-box_domain_containing_protein

Euk-Vir

Pandoravirus_macleodensis

F-box_domain_containing_protein__YP_009481143__Pandoravirus_macleodensis__2107707

Identity

Accession:
YP_009481143 ↗
Protein ID:
F-box_domain_containing_protein
Kingdom:
euk

Quality

77.4 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_macleodensis

TaxID: 2107707

Cluster

View cluster (138 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 260-386
PDB
Domain cluster: rep: Morn_repeat_domain_containing_protein__YP_008319348__Pandoravirus_dulcis__1349409__D249-349
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF02493.27 best MORN 7.8 5.20e+00 18.1% 91.3%
PF02493.27 MORN 16.9 6.30e-03 18.1% 73.9%
D2 medium residues 5-75
PDB
Domain cluster: rep: F-box_domain__YP_008436757__Pandoravirus_salinus__1349410__D22-118
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12937.13 best F-box-like 29.2 8.50e-07 66.2% 93.6%
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ovrB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.89 67.0 6.21e-01 100.0% 64.4%
3v7dD01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.87 81.0 7.11e-01 100.0% 80.0%
3l2oB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.75 68.0 6.31e-01 100.0% 94.3%
6m90A01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.72 65.0 5.79e-01 100.0% 82.8%
2i39B00 1.10.437.20 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus 0.68 46.0 3.87e-01 70.4% 48.7%
1fs2A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.61 56.0 3.74e-01 100.0% 29.3%
1t72A01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.59 40.0 3.46e-01 70.4% 79.5%
4ye6A02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.58 36.0 3.87e-01 74.6% 75.9%
4jqfA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 3.83e-01 73.2% 76.7%
4hteA03 1.10.167.30 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › 0.55 33.0 3.19e-01 78.9% 51.2%
5u1aL00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.53 36.0 2.83e-01 71.8% 80.7%
3pubA01 1.10.10.2400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain 0.53 44.0 4.42e-01 94.4% 100.0%
6t0bf00 1.25.40.40 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI 0.52 46.0 4.13e-01 100.0% 92.2%
2w02B06 1.10.340.60 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › AcsD, palm domain, helix bundle 0.52 45.0 4.13e-01 97.2% 100.0%
2be4A02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.51 37.0 3.37e-01 78.9% 70.3%
4lzjA02 1.10.8.1080 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.51 41.0 4.02e-01 97.2% 81.0%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.50 33.0 3.22e-01 70.4% 59.3%
4irfB00 1.10.1780.10 Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain 0.50 34.0 2.76e-01 70.4% 87.5%
ECOD (92)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3248494 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.93 72.0 7.53e-01 98.6% 87.7%
3472074 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.91 83.0 7.41e-01 100.0% 72.6%
3903968 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.91 81.0 8.01e-01 100.0% 90.7%
3845951 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.91 79.0 7.37e-01 95.8% 76.5%
3301272 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 81.0 6.80e-01 100.0% 61.8%
3901480 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 80.0 7.64e-01 100.0% 85.0%
3643181 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 74.0 7.32e-01 100.0% 85.3%
3886321 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 79.0 7.54e-01 98.6% 85.0%
3879992 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 78.0 7.49e-01 100.0% 83.7%
3407033 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 78.0 7.66e-01 100.0% 89.3%
3299128 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 78.0 6.81e-01 100.0% 67.0%
3613821 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 71.0 7.21e-01 100.0% 87.1%
3617852 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 76.0 7.67e-01 100.0% 94.3%
3276040 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 69.0 7.00e-01 100.0% 84.3%
3429995 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 72.0 7.13e-01 100.0% 84.9%
3762363 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.86 73.0 4.19e-01 94.4% 11.3%
3903969 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 76.0 6.96e-01 100.0% 74.4%
3861026 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 76.0 6.74e-01 100.0% 69.4%
4023099 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 81.0 6.71e-01 100.0% 80.0%
3806475 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 74.0 7.28e-01 100.0% 86.7%
3654886 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 72.0 7.12e-01 100.0% 85.3%
3644704 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 79.0 7.42e-01 100.0% 88.2%
4545458 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 78.0 6.90e-01 100.0% 86.0%
3547224 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 72.0 6.71e-01 95.8% 75.3%
3457731 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 78.0 7.46e-01 100.0% 92.5%
3810074 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.84 73.0 7.05e-01 100.0% 83.5%
3821430 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 72.0 6.95e-01 100.0% 82.5%
3698023 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 77.0 6.46e-01 100.0% 77.4%
3250931 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 69.0 6.79e-01 100.0% 85.3%
3204462 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 78.0 6.26e-01 100.0% 80.8%
3742900 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 76.0 6.05e-01 100.0% 84.4%
3485475 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 75.0 7.03e-01 100.0% 81.2%
3312720 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 73.0 7.24e-01 100.0% 92.0%
3740971 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 77.0 7.19e-01 100.0% 84.7%
3300009 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 74.0 7.09e-01 100.0% 85.0%
3363533 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 74.0 7.31e-01 100.0% 96.0%
3706611 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.82 62.0 6.30e-01 80.3% 88.6%
3446581 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 76.0 7.08e-01 100.0% 88.2%
3578612 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 74.0 6.47e-01 100.0% 70.5%
3373180 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 73.0 4.95e-01 100.0% 28.3%
3344543 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.81 75.0 7.06e-01 100.0% 87.1%
3652521 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 75.0 7.44e-01 100.0% 95.9%
3204329 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 75.0 6.47e-01 100.0% 81.9%
3685535 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 77.0 7.31e-01 100.0% 91.3%
3425357 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 74.0 7.19e-01 100.0% 92.3%
3827406 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 73.0 6.81e-01 97.2% 83.5%
3664299 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 73.0 6.58e-01 98.6% 84.2%
3916304 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.80 74.0 6.81e-01 100.0% 80.0%
3209791 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 66.0 6.93e-01 88.7% 100.0%
3194125 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 76.0 7.23e-01 100.0% 90.0%
3355293 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 75.0 6.56e-01 100.0% 84.0%
3428197 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.80 73.0 7.01e-01 98.6% 92.5%
3301883 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 73.0 7.00e-01 100.0% 92.5%
3403835 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.80 73.0 6.89e-01 100.0% 89.4%
3651806 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 70.0 6.76e-01 100.0% 85.0%
3739768 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 72.0 6.74e-01 100.0% 95.3%
3263433 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 73.0 6.03e-01 100.0% 89.2%
3623404 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 74.0 6.13e-01 100.0% 74.8%
3829036 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 57.0 5.19e-01 76.1% 98.9%
3355899 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 73.0 6.81e-01 100.0% 92.9%
3363836 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 73.0 6.83e-01 100.0% 88.2%
3696138 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 72.0 6.50e-01 100.0% 84.2%
3902012 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 65.0 6.57e-01 100.0% 91.4%
4019682 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 71.0 6.42e-01 100.0% 83.2%
3675534 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.77 70.0 6.73e-01 100.0% 86.3%
3380116 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 66.0 6.78e-01 100.0% 97.1%
3185324 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 71.0 6.79e-01 98.6% 92.5%
3256545 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 62.0 6.41e-01 93.0% 93.8%
3309226 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 70.0 5.89e-01 100.0% 82.6%
3274776 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 71.0 6.36e-01 100.0% 73.7%
4879175 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 63.0 6.61e-01 95.8% 98.4%
3422328 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.77 70.0 6.60e-01 100.0% 89.4%
3259869 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 69.0 6.50e-01 100.0% 85.9%
3453805 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 69.0 6.01e-01 100.0% 66.7%
3347793 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 66.0 6.54e-01 100.0% 89.3%
3308764 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 69.0 6.82e-01 100.0% 96.0%
3439829 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 63.0 5.81e-01 100.0% 71.1%
3477761 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 69.0 6.45e-01 100.0% 81.2%
3473623 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 63.0 5.98e-01 100.0% 77.6%
3233721 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 65.0 6.05e-01 100.0% 76.7%
3781279 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 67.0 6.44e-01 100.0% 87.5%
3461729 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 68.0 6.23e-01 100.0% 87.8%
3346715 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.74 67.0 6.61e-01 100.0% 93.3%
3579997 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.74 63.0 6.35e-01 97.2% 97.1%
3442747 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 67.0 6.02e-01 98.6% 85.3%
3381011 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.73 56.0 4.63e-01 81.7% 77.4%
3655623 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.72 65.0 5.46e-01 97.2% 68.7%
3476446 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.71 63.0 5.83e-01 100.0% 90.0%
3738910 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.70 60.0 5.71e-01 100.0% 80.0%
3186415 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.69 61.0 5.79e-01 100.0% 85.9%
4021839 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 58.0 5.58e-01 100.0% 88.2%
3257315 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.61 48.0 4.87e-01 93.0% 88.6%