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F-box_domain_containing_protein

Euk-Vir

Pandoravirus_macleodensis

F-box_domain_containing_protein__YP_009481257__Pandoravirus_macleodensis__2107707

Identity

Accession:
YP_009481257 ↗
Protein ID:
F-box_domain_containing_protein
Kingdom:
euk

Quality

60.7 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_macleodensis

TaxID: 2107707

Cluster

View cluster (22 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 415-549
PDB
D2 medium residues 76-164
PDB
Domain cluster: rep: Pentapeptide_4_domain_containing_protein__YP_008318822__Pandoravirus_dulcis__1349409__D22-84
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF12937.13 best F-box-like 34.2 2.40e-08 50.6% 89.4%
PF00646.39 F-box 26.2 7.90e-06 46.1% 90.7%
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ovrB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.76 46.0 4.67e-01 93.3% 62.1%
3v7dD01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.74 52.0 5.04e-01 100.0% 65.0%
2e31A01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.74 47.0 5.44e-01 100.0% 91.9%
6m90A01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.66 53.0 5.14e-01 100.0% 76.8%
3l2oB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.60 51.0 5.14e-01 96.6% 92.0%
8an5A01 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.56 41.0 3.31e-01 78.7% 96.9%
2fnoA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 36.0 3.13e-01 71.9% 86.9%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3276040 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.92 51.0 5.80e-01 97.8% 71.4%
3806475 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 55.0 6.05e-01 98.9% 77.3%
3261282 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.86 51.0 6.48e-01 88.8% 98.2%
3770072 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 56.0 5.62e-01 100.0% 66.7%
3407033 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 54.0 5.92e-01 100.0% 78.7%
3652521 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 57.0 6.27e-01 98.9% 84.9%
3886321 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 56.0 5.90e-01 100.0% 76.2%
3245054 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 50.0 6.21e-01 95.5% 98.2%
3248494 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 51.0 5.99e-01 96.6% 86.2%
3646821 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 55.0 6.01e-01 100.0% 81.3%
3810074 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.83 55.0 5.82e-01 98.9% 75.9%
3355293 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 53.0 5.09e-01 100.0% 58.0%
3781279 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 58.0 6.12e-01 98.9% 80.0%
3812115 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.83 58.0 6.31e-01 100.0% 87.7%
3547224 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 55.0 5.67e-01 98.9% 71.8%
3617289 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 51.0 6.08e-01 92.1% 93.3%
3320433 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 50.0 5.99e-01 97.8% 91.7%
3301272 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 54.0 5.03e-01 100.0% 55.5%
3428197 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 53.0 5.58e-01 100.0% 73.8%
3472074 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 55.0 5.40e-01 100.0% 65.3%
3350782 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 55.0 3.64e-01 100.0% 19.3%
3792735 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 56.0 3.54e-01 100.0% 16.2%
3664817 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 55.0 5.84e-01 98.9% 78.8%
3337545 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 49.0 5.67e-01 97.8% 84.6%
3845951 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 52.0 5.33e-01 97.8% 69.4%
3711287 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.80 52.0 4.88e-01 100.0% 56.7%
3522358 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 52.0 5.63e-01 97.8% 78.7%
3250931 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 53.0 5.71e-01 100.0% 80.0%
4545458 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 55.0 5.33e-01 100.0% 64.0%
3209791 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 51.0 5.89e-01 98.9% 89.2%
3256545 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 52.0 6.03e-01 97.8% 92.3%
3654886 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 52.0 5.58e-01 98.9% 78.7%
3821430 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 52.0 5.50e-01 100.0% 75.0%
3235397 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 48.0 5.67e-01 97.8% 90.0%
3425357 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 55.0 5.85e-01 100.0% 82.1%
3613821 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 51.0 5.73e-01 100.0% 84.3%
3901480 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 53.0 5.65e-01 98.9% 77.5%
3429995 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 49.0 5.40e-01 98.9% 78.1%
3507975 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.78 54.0 3.61e-01 100.0% 20.3%
3176338 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 54.0 5.65e-01 100.0% 78.8%
3323668 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.77 53.0 5.78e-01 100.0% 84.0%
3575456 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.77 55.0 5.51e-01 100.0% 73.3%
3644704 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 57.0 5.86e-01 100.0% 81.2%
3186415 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 55.0 5.69e-01 97.8% 78.8%
3726840 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.76 54.0 5.87e-01 100.0% 86.7%
4023603 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 53.0 5.88e-01 100.0% 91.4%
3903969 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 53.0 5.34e-01 96.6% 72.2%
3617852 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 52.0 5.86e-01 100.0% 91.4%
3861026 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 54.0 5.21e-01 100.0% 67.3%
3803973 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 50.0 5.58e-01 98.9% 87.1%
3643181 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 51.0 5.50e-01 100.0% 82.7%
3731690 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.74 53.0 5.54e-01 98.9% 81.2%
3311874 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.74 51.0 5.55e-01 100.0% 84.0%
3346715 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.74 50.0 5.45e-01 100.0% 82.7%
3257387 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 53.0 5.50e-01 97.8% 77.6%
3259869 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.74 54.0 5.51e-01 100.0% 78.8%
3651806 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.73 50.0 5.24e-01 98.9% 77.5%
3174979 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.72 51.0 5.33e-01 97.8% 82.5%
3730967 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.72 56.0 5.25e-01 96.6% 68.6%
3300713 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.71 49.0 5.29e-01 100.0% 84.0%
3879992 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.71 51.0 5.35e-01 100.0% 81.2%
3300009 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.71 51.0 5.36e-01 100.0% 82.5%
3726578 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.70 52.0 5.40e-01 100.0% 82.4%
3400371 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.69 54.0 5.27e-01 100.0% 76.8%
3909942 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 49.0 4.54e-01 100.0% 60.0%
3446581 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 52.0 5.39e-01 100.0% 84.7%
4019682 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 56.0 5.49e-01 100.0% 81.1%
3273645 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 53.0 5.62e-01 100.0% 92.5%
3664299 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 57.0 5.62e-01 100.0% 82.1%
3696138 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 55.0 5.41e-01 100.0% 80.0%
4022899 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.68 53.0 5.05e-01 100.0% 72.0%
3194125 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.67 51.0 5.44e-01 100.0% 88.7%
3348915 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.66 57.0 5.25e-01 100.0% 73.6%
3856479 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.65 49.0 3.14e-01 78.7% 54.0%
3536855 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.65 56.0 5.52e-01 100.0% 86.3%
3902311 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.65 53.0 5.49e-01 96.6% 91.8%
4013644 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.64 52.0 5.26e-01 100.0% 84.4%
3204462 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.64 59.0 5.24e-01 100.0% 76.0%
3355899 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.63 52.0 5.36e-01 100.0% 90.6%
3644174 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.63 47.0 5.10e-01 98.9% 92.0%
3729172 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.61 55.0 5.07e-01 97.8% 77.3%
3184741 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.58 53.0 4.96e-01 100.0% 87.3%
3490408 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.56 53.0 4.72e-01 100.0% 88.3%
4023099 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.56 53.0 4.78e-01 100.0% 94.8%
3742900 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.56 53.0 4.49e-01 100.0% 66.7%
3698023 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.55 52.0 4.70e-01 100.0% 93.9%
3193842 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.51 46.0 4.10e-01 100.0% 70.4%
D3 medium residues 222-392
PDB