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F-box_domain_containing_protein
Euk-VirPandoravirus_macleodensis
F-box_domain_containing_protein__YP_009481534__Pandoravirus_macleodensis__2107707
Identity
- Accession:
- YP_009481534 ↗
- Protein ID:
- F-box_domain_containing_protein
- Kingdom:
- euk
Quality
71.7
mean pLDDT
Cluster
View cluster (47 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-93
D2
medium
residues 264-346
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.62 | 34.0 | 3.78e-01 | 91.6% | 65.2% |
| 3t46A00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.61 | 36.0 | 3.77e-01 | 90.4% | 64.0% |
| 2pmrA00 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.59 | 36.0 | 3.75e-01 | 91.6% | 65.8% |
| 3egoA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.58 | 46.0 | 4.09e-01 | 86.7% | 81.0% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.58 | 34.0 | 3.41e-01 | 95.2% | 54.0% |
| 2jlnA00 | 1.10.4160.10 | Mainly Alpha › Orthogonal Bundle › Hydantoin permease › Hydantoin permease | 0.58 | 47.0 | 2.98e-01 | 91.6% | 64.6% |
| 2af7D00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.56 | 36.0 | 3.22e-01 | 72.3% | 44.6% |
| 3beyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.55 | 36.0 | 3.54e-01 | 73.5% | 59.6% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.53 | 33.0 | 3.39e-01 | 89.2% | 64.6% |
| 2q0oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 38.0 | 4.21e-01 | 79.5% | 97.0% |
| 3h1tA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 41.0 | 3.11e-01 | 85.5% | 88.9% |
| 1hbkA00 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.52 | 38.0 | 3.73e-01 | 78.3% | 71.9% |
| 2ppqA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.52 | 37.0 | 2.85e-01 | 77.1% | 65.4% |
| 8h72B01 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.52 | 41.0 | 2.87e-01 | 97.6% | 24.1% |
| 5k7fA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 36.0 | 3.14e-01 | 74.7% | 71.7% |
| 4i0xG00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.51 | 35.0 | 3.85e-01 | 98.8% | 88.2% |
| 6yz2A01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.51 | 42.0 | 3.73e-01 | 90.4% | 86.7% |
| 2gxaE01 | 1.10.10.510 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain | 0.51 | 36.0 | 3.82e-01 | 85.5% | 84.9% |
| 5aexJ00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.51 | 40.0 | 2.57e-01 | 86.7% | 71.9% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3212799 | 632.1.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain | 0.57 | 36.0 | 3.64e-01 | 95.2% | 61.2% |
| 4076485 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.55 | 38.0 | 3.81e-01 | 97.6% | 69.4% |
| 4025989 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.55 | 47.0 | 3.45e-01 | 97.6% | 47.7% |
| 3791227 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.54 | 37.0 | 3.82e-01 | 81.9% | 75.6% |
| 5001222 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 37.0 | 2.64e-01 | 72.3% | 27.8% |
| 5044067 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.53 | 36.0 | 3.55e-01 | 97.6% | 64.4% |
| 4682355 | 632.22.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › EzrA | 0.53 | 33.0 | 3.33e-01 | 98.8% | 61.2% |
| 3853461 | 1075.1.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 | 0.52 | 39.0 | 2.87e-01 | 83.1% | 49.8% |
| 4483577 | 140.1.1.6 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1,tRNA-synt_1g | 0.51 | 42.0 | 3.34e-01 | 92.8% | 58.4% |
| 3571483 | 60.1.1.16 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › MTBP_C | 0.50 | 32.0 | 3.33e-01 | 90.4% | 68.4% |
D3
medium
residues 347-436
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dnpA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 44.0 | 3.97e-01 | 76.7% | 65.9% |
| 1paqA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.59 | 51.0 | 4.29e-01 | 100.0% | 91.3% |
| 2ovjA00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.59 | 40.0 | 3.20e-01 | 72.2% | 88.6% |
| 1zzpA00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.52 | 36.0 | 3.38e-01 | 71.1% | 87.2% |
| 2gmyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.52 | 41.0 | 3.57e-01 | 87.8% | 89.0% |
| 5o5jT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.51 | 35.0 | 3.62e-01 | 100.0% | 77.6% |
| 3gs3A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.50 | 43.0 | 3.26e-01 | 100.0% | 53.4% |
| 3fflA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 43.0 | 3.93e-01 | 100.0% | 74.6% |
| 2ijeS00 | 1.10.840.10 | Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain | 0.50 | 44.0 | 3.26e-01 | 98.9% | 56.5% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4349221 | 109.3.1.166 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 | 0.75 | 63.0 | 4.63e-01 | 100.0% | 36.0% |
| 3741962 | 1065.1.1.11 ↗ | alpha bundles › SPX domain › SPX domain › SPX domain › Ank_2, Ank_5 | 0.65 | 58.0 | 3.71e-01 | 100.0% | 29.1% |
| 3582304 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 49.0 | 3.97e-01 | 83.3% | 67.4% |
| 4010159 | 621.1.1.10 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › DUF4118 | 0.63 | 46.0 | 4.34e-01 | 77.8% | 85.5% |
| 3380457 | 109.4.1.1746 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30924 | 0.55 | 47.0 | 3.56e-01 | 100.0% | 54.4% |
| 3310391 | 109.4.1.293 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPP2R1A-like_HEAT | 0.55 | 48.0 | 4.73e-01 | 98.9% | 95.8% |
D4
medium
residues 437-491
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gyoB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.84 | 71.0 | 5.20e-01 | 92.7% | 45.3% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.78 | 61.0 | 4.99e-01 | 85.5% | 86.3% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 65.0 | 6.21e-01 | 90.9% | 100.0% |
| 2ho1B00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.76 | 59.0 | 3.91e-01 | 85.5% | 24.4% |
| 7zcvA02 | 1.25.40.400 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.76 | 60.0 | 4.02e-01 | 87.3% | 32.9% |
| 4malA00 | 1.20.58.2200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.73 | 56.0 | 5.51e-01 | 85.5% | 91.5% |
| 3sz7A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.72 | 59.0 | 4.37e-01 | 92.7% | 37.7% |
| 8amzO01 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.72 | 63.0 | 3.86e-01 | 98.2% | 22.9% |
| 6z0fA02 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.72 | 61.0 | 4.32e-01 | 94.5% | 33.7% |
| 2l6jA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.71 | 57.0 | 4.63e-01 | 90.9% | 52.3% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.71 | 58.0 | 5.37e-01 | 94.5% | 96.0% |
| 2ptfB02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.71 | 56.0 | 5.60e-01 | 87.3% | 100.0% |
| 2dsjA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.71 | 54.0 | 5.15e-01 | 85.5% | 82.1% |
| 6fdpA00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.70 | 56.0 | 4.48e-01 | 92.7% | 46.7% |
| 3beyD00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.69 | 52.0 | 4.35e-01 | 81.8% | 56.4% |
| 1konA01 | 1.10.10.200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain | 0.68 | 51.0 | 4.81e-01 | 81.8% | 76.5% |
| 4evfA01 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.68 | 57.0 | 5.35e-01 | 98.2% | 88.7% |
| 3ljnA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.68 | 54.0 | 3.36e-01 | 87.3% | 28.6% |
| 1vkeB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.67 | 53.0 | 4.37e-01 | 87.3% | 64.4% |
| 4hs2A00 | 1.25.40.420 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.67 | 48.0 | 4.58e-01 | 76.4% | 85.9% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.66 | 53.0 | 4.32e-01 | 87.3% | 61.0% |
| 4neiA01 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.64 | 53.0 | 3.35e-01 | 100.0% | 30.5% |
| 1owlA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.63 | 51.0 | 4.08e-01 | 94.5% | 57.7% |
| 5z2mB00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.63 | 52.0 | 3.94e-01 | 92.7% | 46.7% |
| 2l7kA00 | 1.10.10.1850 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sporulation protein-like | 0.62 | 46.0 | 4.20e-01 | 81.8% | 59.2% |
| 3i3nA01 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.60 | 52.0 | 3.93e-01 | 100.0% | 66.7% |
| 2kn6A02 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.58 | 42.0 | 3.65e-01 | 76.4% | 65.9% |
| 3r0vA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 47.0 | 3.03e-01 | 90.9% | 87.9% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 39.0 | 3.65e-01 | 74.5% | 81.2% |
| 2bkkC02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.55 | 44.0 | 3.28e-01 | 100.0% | 88.4% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3422293 | 109.4.1.1271 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 | 0.88 | 78.0 | 6.11e-01 | 94.5% | 53.3% |
| 3412596 | 109.4.1.68 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Coatomer_E | 0.85 | 69.0 | 4.21e-01 | 87.3% | 17.7% |
| 3453706 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.85 | 71.0 | 6.26e-01 | 92.7% | 67.5% |
| 3817939 | 109.4.1.1282 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, TPR_24 | 0.84 | 68.0 | 4.38e-01 | 87.3% | 23.2% |
| 3575437 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.83 | 74.0 | 5.82e-01 | 98.2% | 50.9% |
| 3804606 | 109.4.1.1256 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 | 0.83 | 67.0 | 5.31e-01 | 87.3% | 50.5% |
| 3205633 | 109.4.1.98 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.82 | 65.0 | 5.10e-01 | 85.5% | 47.3% |
| 3439874 | 109.4.1.1258 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 | 0.82 | 73.0 | 4.22e-01 | 98.2% | 13.5% |
| 3453247 | 109.59.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain › PPR_2 | 0.82 | 65.0 | 5.43e-01 | 87.3% | 57.4% |
| 3816081 | 109.4.1.1524 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_ZFYVE26 | 0.80 | 63.0 | 4.03e-01 | 90.9% | 18.4% |
| 3918097 | 109.4.1.192 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 | 0.80 | 67.0 | 3.87e-01 | 90.9% | 15.3% |
| 3326751 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.80 | 69.0 | 3.94e-01 | 98.2% | 9.6% |
| 3779714 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.80 | 64.0 | 3.83e-01 | 87.3% | 15.6% |
| 3580037 | 109.4.1.12 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Clathrin | 0.80 | 62.0 | 4.70e-01 | 85.5% | 38.5% |
| 3458178 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.79 | 70.0 | 5.02e-01 | 98.2% | 38.1% |
| 4095142 | 109.4.1.465 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SPO22 | 0.79 | 66.0 | 5.00e-01 | 90.9% | 45.6% |
| 3708851 | 4030.1.1.0 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | 0.79 | 65.0 | 6.20e-01 | 92.7% | 84.6% |
| 3458250 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.78 | 65.0 | 4.83e-01 | 92.7% | 40.7% |
| 3368137 | 109.4.1.775 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.78 | 63.0 | 4.44e-01 | 89.1% | 30.6% |
| 3744598 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.78 | 64.0 | 5.25e-01 | 90.9% | 61.0% |
| 3422731 | 109.4.1.1767 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, E_motif | 0.78 | 64.0 | 4.72e-01 | 92.7% | 36.5% |
| 3438912 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.78 | 62.0 | 3.99e-01 | 87.3% | 21.6% |
| 3298490 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.78 | 68.0 | 5.32e-01 | 98.2% | 49.6% |
| 3436448 | 109.4.1.184 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1 | 0.77 | 67.0 | 6.34e-01 | 96.4% | 81.5% |
| 3654164 | 109.4.1.1156 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif | 0.77 | 66.0 | 4.84e-01 | 98.2% | 40.7% |
| 3298613 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.76 | 66.0 | 4.20e-01 | 98.2% | 22.2% |
| 3684040 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.76 | 65.0 | 4.46e-01 | 98.2% | 29.7% |
| 3297097 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.76 | 67.0 | 5.37e-01 | 98.2% | 56.2% |
| 3471979 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.76 | 65.0 | 3.91e-01 | 94.5% | 15.8% |
| 4009332 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.75 | 58.0 | 3.45e-01 | 85.5% | 11.7% |
| 3438034 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.75 | 63.0 | 4.43e-01 | 98.2% | 30.3% |
| 3305205 | 109.4.1.1273 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 | 0.74 | 63.0 | 4.45e-01 | 98.2% | 35.4% |
| 3203000 | 109.4.1.30 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT | 0.74 | 63.0 | 4.12e-01 | 96.4% | 83.3% |
| 3821288 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.73 | 61.0 | 4.48e-01 | 98.2% | 34.4% |
| 3786934 | 109.3.1.162 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 | 0.73 | 58.0 | 3.70e-01 | 87.3% | 25.5% |
| 3689499 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.72 | 62.0 | 4.00e-01 | 100.0% | 51.8% |
| 3819025 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.72 | 57.0 | 3.72e-01 | 90.9% | 35.4% |
| 4284044 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 62.0 | 4.52e-01 | 98.2% | 50.0% |
| 3970731 | 4995.1.1.0 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like | 0.71 | 55.0 | 4.83e-01 | 83.6% | 86.3% |
| 3903390 | 109.4.1.613 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Asp_Glu_race_2 | 0.70 | 62.0 | 4.36e-01 | 100.0% | 47.6% |
| 3618589 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 59.0 | 3.66e-01 | 100.0% | 20.9% |
| 3963715 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 58.0 | 5.00e-01 | 100.0% | 65.3% |
| 4999825 | 4995.1.1.1 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 | 0.69 | 53.0 | 4.37e-01 | 83.6% | 77.0% |
| 3244781 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 54.0 | 3.91e-01 | 85.5% | 33.8% |
| 3822893 | 109.4.1.109 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 | 0.67 | 56.0 | 4.24e-01 | 100.0% | 60.7% |
| 4843090 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.67 | 51.0 | 4.22e-01 | 89.1% | 95.5% |
| 4671382 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 53.0 | 3.39e-01 | 100.0% | 19.7% |
| 4299755 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.61 | 49.0 | 2.93e-01 | 89.1% | 24.6% |
| 4611981 | 109.3.1.164 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 | 0.60 | 51.0 | 3.97e-01 | 98.2% | 46.2% |
| 4214737 | 628.1.1.1 ↗ | alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD | 0.60 | 52.0 | 3.67e-01 | 96.4% | 76.8% |
D5
medium
residues 492-579