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F-box_domain_containing_protein

Euk-Vir

Pandoravirus_neocaledonia

F-box_domain_containing_protein__YP_009482123__Pandoravirus_neocaledonia__2107708

Identity

Accession:
YP_009482123 ↗
Protein ID:
F-box_domain_containing_protein
Kingdom:
euk

Quality

66.0 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

Cluster

View cluster (17 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 361-525
PDB
Domain cluster: rep: ankyrin_repeat_domain__YP_008438136__Pandoravirus_salinus__1349410__D147-342
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3b7bB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.75 68.0 6.07e-01 95.8% 70.5%
1wdyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.74 70.0 5.69e-01 98.8% 83.5%
5eidA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.74 54.0 6.21e-01 78.8% 100.0%
1n11A00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.73 67.0 4.93e-01 97.0% 47.3%
3eu9C00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.73 68.0 6.04e-01 99.4% 88.5%
1qymA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.72 66.0 5.89e-01 97.6% 86.1%
6if3A00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.72 56.0 5.73e-01 83.6% 84.3%
3uxgA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.71 65.0 6.60e-01 97.6% 98.2%
4hi8A00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.71 64.0 6.36e-01 98.2% 92.9%
1a5eA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.66 52.0 5.36e-01 98.2% 86.5%
4bszB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.66 55.0 5.79e-01 97.0% 96.7%
3ljnA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.64 58.0 4.75e-01 100.0% 71.4%
4leuA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 57.0 5.59e-01 100.0% 92.9%
5vjcA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.53 47.0 4.05e-01 97.6% 92.7%
3t5vA00 1.25.40.990 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 44.0 3.71e-01 95.8% 69.6%
3kaeA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 43.0 3.93e-01 95.2% 67.6%
1hh8A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 44.0 4.28e-01 97.6% 87.0%
ECOD (90)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3272965 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.84 51.0 6.48e-01 78.8% 97.1%
3260809 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.78 61.0 6.75e-01 93.3% 100.0%
3267273 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.77 53.0 6.23e-01 83.6% 100.0%
3259553 109.3.1.20 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 0.75 66.0 5.28e-01 100.0% 49.7%
3733564 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.75 48.0 5.78e-01 78.2% 96.4%
3323300 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.74 67.0 6.03e-01 93.9% 72.6%
4306725 109.3.1.20 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 0.73 68.0 5.73e-01 97.6% 64.2%
3247851 109.3.1.33 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_3 0.72 64.0 6.54e-01 93.9% 100.0%
3255754 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.72 68.0 4.88e-01 100.0% 52.5%
3370231 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.70 52.0 5.85e-01 80.6% 100.0%
3275803 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.70 65.0 4.76e-01 98.8% 41.7%
3267275 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.70 63.0 6.08e-01 96.4% 87.0%
3257672 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.69 64.0 4.33e-01 100.0% 32.9%
3171227 109.3.1.20 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 0.68 59.0 5.36e-01 100.0% 69.5%
3259472 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.68 48.0 5.41e-01 80.6% 95.2%
3260808 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.68 61.0 5.26e-01 98.2% 62.7%
3967836 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.67 60.0 5.80e-01 95.8% 91.4%
4042478 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.66 56.0 3.91e-01 100.0% 28.4%
3254410 109.3.1.10 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_4 0.66 48.0 5.42e-01 88.5% 100.0%
3198211 109.3.1.347 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_KRIT1 0.66 61.0 4.69e-01 100.0% 47.8%
3695738 109.3.1.232 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_KRIT1 0.65 61.0 4.50e-01 100.0% 56.3%
3252037 109.3.1.20 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 0.64 58.0 5.62e-01 98.2% 98.9%
3197410 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.64 58.0 4.29e-01 99.4% 58.3%
3646075 109.3.1.244 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › zf-CCCH_AtC3H23 0.63 56.0 5.04e-01 93.3% 75.0%
3316486 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.62 54.0 4.65e-01 98.8% 58.9%
3994644 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 49.0 3.16e-01 97.6% 17.4%
3733315 109.3.1.166 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 0.61 56.0 5.34e-01 99.4% 92.3%
3251931 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.60 55.0 4.62e-01 100.0% 69.5%
3463299 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.59 44.0 4.84e-01 84.2% 98.5%
3327011 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.59 39.0 4.57e-01 76.4% 99.1%
3813373 109.4.1.1331 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long, E_motif 0.57 49.0 3.43e-01 98.8% 26.5%
3380640 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 48.0 4.18e-01 89.1% 58.8%
3468311 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.57 49.0 3.81e-01 92.1% 43.3%
3369483 109.4.1.1272 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif 0.57 51.0 4.50e-01 98.8% 66.0%
3436625 109.4.1.1331 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long, E_motif 0.57 50.0 3.91e-01 96.4% 46.4%
3672160 109.4.1.1258 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.56 48.0 4.58e-01 97.0% 77.0%
3464798 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.56 48.0 4.80e-01 96.4% 90.0%
3808528 109.4.1.1271 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 0.56 49.0 4.96e-01 98.8% 97.5%
3308044 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.56 42.0 4.51e-01 84.2% 94.1%
3435214 109.4.1.2064 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif, TPR_24 0.56 49.0 3.32e-01 97.0% 26.1%
3372661 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.56 48.0 4.48e-01 96.4% 75.6%
3462320 109.4.1.1258 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.56 47.0 4.32e-01 96.4% 68.0%
3385274 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.56 47.0 4.21e-01 93.9% 64.8%
3310170 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.56 49.0 3.79e-01 96.4% 42.1%
3362073 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.55 43.0 4.68e-01 88.5% 100.0%
3371543 109.4.1.1599 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase 0.55 48.0 4.03e-01 94.5% 55.4%
3978045 109.3.1.447 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF30167 0.55 43.0 4.65e-01 85.5% 97.9%
3436796 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.55 48.0 3.28e-01 94.5% 26.6%
3669624 109.4.1.1293 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1 0.55 45.0 4.56e-01 94.5% 87.9%
3661675 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.55 42.0 4.59e-01 84.2% 100.0%
3352831 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.55 48.0 3.68e-01 95.2% 41.3%
3301008 109.4.1.1274 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, PPR_long 0.55 50.0 4.00e-01 99.4% 51.7%
3469222 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.55 43.0 4.61e-01 84.2% 100.0%
3807989 109.4.1.2070 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2, E_motif 0.55 47.0 3.48e-01 93.9% 35.9%
3327782 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.55 49.0 3.15e-01 97.6% 48.2%
3826500 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.55 46.0 4.41e-01 94.5% 76.5%
3827366 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.55 40.0 4.20e-01 84.8% 84.0%
3321942 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.55 41.0 4.43e-01 84.8% 92.9%
3679045 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.55 47.0 3.86e-01 96.4% 50.0%
3447760 109.4.1.1258 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.55 45.0 3.91e-01 90.3% 57.4%
3379315 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.55 43.0 4.51e-01 89.7% 92.7%
3832763 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.55 42.0 4.45e-01 86.7% 92.4%
3669286 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.54 47.0 4.20e-01 98.8% 64.9%
3837917 109.4.1.1908 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_long, E_motif 0.54 46.0 4.39e-01 94.5% 77.0%
3361463 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.54 46.0 3.99e-01 96.4% 57.7%
3657871 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.54 47.0 3.85e-01 94.5% 50.8%
3824397 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.54 47.0 4.48e-01 96.4% 79.5%
3661551 109.4.1.1560 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, E_motif 0.54 46.0 4.34e-01 95.2% 75.1%
3821987 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.54 46.0 4.63e-01 97.0% 91.2%
3678516 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.54 39.0 4.40e-01 84.2% 100.0%
3359438 109.4.1.1560 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, E_motif 0.54 48.0 3.74e-01 97.0% 49.2%
3677128 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.54 47.0 4.20e-01 96.4% 66.8%
3832526 109.4.1.1860 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, Eplus_motif, E_motif 0.54 48.0 3.44e-01 96.4% 34.0%
3423625 109.4.1.1371 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, Eplus_motif, E_motif 0.54 48.0 3.33e-01 97.6% 67.2%
3825925 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.54 40.0 4.18e-01 86.1% 83.2%
3304690 109.4.1.1335 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, E_motif 0.54 46.0 3.65e-01 94.5% 46.8%
3424647 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.54 47.0 3.67e-01 96.4% 43.0%
3345657 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.54 46.0 4.17e-01 97.0% 66.8%
3445104 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.54 47.0 4.70e-01 95.8% 96.4%
3353090 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.53 45.0 4.60e-01 96.4% 94.4%
3350919 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.53 43.0 4.12e-01 97.0% 72.5%
3426557 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.53 46.0 3.41e-01 96.4% 35.3%
3310176 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.53 40.0 4.13e-01 88.5% 83.1%
3299887 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.53 37.0 4.19e-01 96.4% 98.3%
3450720 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.53 46.0 4.62e-01 96.4% 98.2%
3469733 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.53 43.0 4.38e-01 94.5% 89.1%
3813221 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.52 41.0 4.38e-01 90.9% 98.6%
3817460 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.51 38.0 3.89e-01 100.0% 81.9%
3641692 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.51 40.0 4.01e-01 97.6% 82.4%
3347896 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.50 45.0 3.52e-01 100.0% 58.0%