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F-box_domain_containing_protein

Euk-Vir

Pandoravirus_neocaledonia

F-box_domain_containing_protein__YP_009482340__Pandoravirus_neocaledonia__2107708

Identity

Accession:
YP_009482340 ↗
Protein ID:
F-box_domain_containing_protein
Kingdom:
euk

Quality

71.6 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

Cluster

View cluster (24 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 223-325
PDB
D2 medium residues 128-222
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4n5qA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.77 70.0 5.13e-01 100.0% 61.0%
6ghmC01 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.77 71.0 6.28e-01 100.0% 91.8%
3ehrA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.76 68.0 6.34e-01 96.8% 96.6%
1n11A00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.76 69.0 4.49e-01 100.0% 28.5%
4bszB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.75 69.0 5.89e-01 100.0% 90.7%
5cecB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.75 69.0 5.41e-01 100.0% 80.3%
3b7bB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.75 68.0 5.11e-01 100.0% 55.8%
2ajaA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.74 67.0 4.55e-01 100.0% 36.2%
4leuA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.74 66.0 5.38e-01 100.0% 63.7%
3twqA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.74 68.0 5.61e-01 100.0% 75.0%
1qymA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.74 68.0 5.09e-01 100.0% 53.8%
3uxgA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.74 67.0 5.56e-01 100.0% 69.3%
4rlyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.74 68.0 4.66e-01 100.0% 38.0%
4hi8A00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.74 67.0 5.49e-01 100.0% 68.8%
5eidA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.73 65.0 5.92e-01 96.8% 92.7%
1wdyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.72 66.0 4.66e-01 100.0% 49.5%
2f37A00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.72 65.0 4.79e-01 100.0% 65.6%
4uucA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.72 65.0 4.93e-01 100.0% 55.7%
2f8xK00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.71 64.0 4.90e-01 100.0% 56.0%
1wy6A00 1.25.40.350 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.69 61.0 5.20e-01 100.0% 74.8%
5aarA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.68 60.0 4.86e-01 100.0% 79.5%
4me2A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 56.0 4.53e-01 100.0% 67.0%
3nb2A02 1.25.40.300 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Putative secreted effector protein 0.61 52.0 4.55e-01 100.0% 86.5%
8gpvA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.60 53.0 4.83e-01 100.0% 79.1%
2yvyA01 1.25.60.10 Mainly Alpha › Alpha Horseshoe › MgtE N-terminal fold › MgtE N-terminal domain-like 0.59 51.0 4.71e-01 98.9% 81.6%
1oyzA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.58 49.0 3.67e-01 100.0% 41.8%
3c02A00 1.20.1080.10 Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. 0.54 42.0 3.24e-01 86.3% 85.5%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3276334 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.80 74.0 5.12e-01 100.0% 38.3%
3260808 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.78 70.0 5.03e-01 100.0% 35.7%
3277019 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.78 70.0 5.06e-01 96.8% 52.9%
3275803 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.77 71.0 4.58e-01 100.0% 31.2%
3247851 109.3.1.33 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_3 0.77 71.0 5.89e-01 100.0% 73.1%
3733564 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.77 69.0 6.55e-01 96.8% 95.5%
4019164 109.3.1.218 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_KRIT1 0.77 70.0 5.56e-01 100.0% 64.9%
3895445 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.76 71.0 6.31e-01 100.0% 88.5%
3859612 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.76 70.0 4.63e-01 100.0% 32.3%
3251931 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.76 70.0 4.93e-01 100.0% 35.3%
3260809 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.76 69.0 6.14e-01 100.0% 80.0%
3388595 109.3.1.163 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 0.75 69.0 4.81e-01 100.0% 43.4%
3234451 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.75 69.0 6.25e-01 100.0% 94.4%
3274155 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.75 69.0 4.73e-01 100.0% 31.9%
3437396 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.75 67.0 5.36e-01 100.0% 58.9%
3203926 109.3.1.164 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.74 69.0 4.70e-01 100.0% 34.5%
4306725 109.3.1.20 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 0.74 68.0 4.88e-01 100.0% 41.5%
3721073 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.74 66.0 5.91e-01 98.9% 87.4%
3630216 109.3.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.74 67.0 5.32e-01 100.0% 61.6%
3252035 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.74 67.0 5.64e-01 100.0% 66.3%
3664022 109.4.1.189 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 0.74 67.0 5.25e-01 100.0% 60.8%
3272965 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.73 67.0 6.44e-01 97.9% 92.4%
3458691 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.73 64.0 5.64e-01 100.0% 77.9%
3260807 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.71 64.0 4.66e-01 100.0% 51.5%
3578344 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.71 64.0 5.14e-01 97.9% 71.7%
4011915 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.71 64.0 5.56e-01 96.8% 96.4%
4674318 109.3.1.164 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.71 63.0 5.82e-01 100.0% 92.8%
3347497 109.4.1.1331 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_long, E_motif 0.70 62.0 4.70e-01 100.0% 46.4%
3252793 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.69 61.0 5.19e-01 98.9% 74.4%
3318084 109.4.1.1269 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, E_motif 0.66 59.0 4.30e-01 100.0% 41.4%
3252563 109.3.1.171 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 0.66 59.0 4.65e-01 100.0% 57.5%
3265998 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 59.0 4.62e-01 100.0% 52.7%
3737457 109.4.1.129 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Leuk-A4-hydro_C 0.66 58.0 5.02e-01 100.0% 73.3%
4175298 109.4.1.129 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Leuk-A4-hydro_C 0.65 57.0 4.86e-01 98.9% 73.1%
3329983 109.4.1.129 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Leuk-A4-hydro_C 0.65 56.0 4.99e-01 100.0% 79.3%
3923046 109.4.1.129 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Leuk-A4-hydro_C 0.64 56.0 4.90e-01 98.9% 76.0%
3253180 109.3.1.171 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 0.64 57.0 4.43e-01 100.0% 65.6%
3722685 109.4.1.129 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Leuk-A4-hydro_C 0.63 55.0 4.81e-01 100.0% 73.3%
3267790 109.3.1.171 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 0.60 53.0 4.42e-01 100.0% 77.1%
4987609 109.13.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › MgtE N-terminal domain-like › MgtE N-terminal domain-like › MgtE_N 0.60 51.0 5.03e-01 98.9% 97.1%
3748301 109.23.1.3 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal domain in vacuolar protein sorting-associated protein 54 › C-terminal domain in vacuolar protein sorting-associated protein 54 › BCD_RFX 0.59 43.0 3.69e-01 76.8% 80.0%
3413290 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.51 36.0 2.53e-01 71.6% 37.1%