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F-box_domain_containing_protein

Euk-Vir

Pandoravirus_neocaledonia

F-box_domain_containing_protein__YP_009482595__Pandoravirus_neocaledonia__2107708

Identity

Accession:
YP_009482595 ↗
Protein ID:
F-box_domain_containing_protein
Kingdom:
euk

Quality

71.9 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

Cluster

View cluster (32 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 74-267
PDB
Domain cluster: rep: F-box_domain_containing_protein__YP_009483832__Pandoravirus_quercus__2107709__D62-270
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF02493.27 best MORN 16.9 6.30e-03 10.3% 73.9%
PF02493.27 MORN 8.6 2.80e+00 6.2% 43.5%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fwvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 38.0 3.84e-01 77.3% 71.1%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 24.0 3.16e-01 79.9% 71.9%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3392098 77.2.1.0 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.84 38.0 5.04e-01 71.6% 75.7%
4030599 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.83 44.0 5.16e-01 100.0% 71.3%
3594212 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.75 43.0 4.73e-01 70.1% 69.4%
3601793 77.2.1.0 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N 0.67 41.0 3.91e-01 70.1% 52.9%
3481698 708.1.2.3 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › Yippee-Mis18 0.51 23.0 2.84e-01 86.6% 63.3%
D2 medium residues 19-73
PDB
Domain cluster: rep: F-box_domain_containing_protein__YP_009482610__Pandoravirus_neocaledonia__2107708__D12-61
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12937.13 best F-box-like 36.4 5.00e-09 72.7% 83.0%
D3 medium residues 278-366
PDB
Domain cluster: rep: F-box_domain_containing_protein__YP_009482379__Pandoravirus_neocaledonia__2107708__D289-374
D4 medium residues 367-465_505-551
PDB