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F-box_domain_containing_protein
Euk-VirPandoravirus_neocaledonia
F-box_domain_containing_protein__YP_009482597__Pandoravirus_neocaledonia__2107708
Identity
- Accession:
- YP_009482597 ↗
- Protein ID:
- F-box_domain_containing_protein
- Kingdom:
- euk
Quality
62.6
mean pLDDT
Cluster
View cluster (25 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-46
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00646.39 best | F-box | 35.5 | 8.80e-09 | 100.0% | 88.4% |
| PF12937.13 | F-box-like | 32.0 | 1.20e-07 | 92.5% | 68.1% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p1oB01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.90 | 73.0 | 7.52e-01 | 90.0% | 97.4% |
| 5ibkB00 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.89 | 77.0 | 7.38e-01 | 100.0% | 84.8% |
| 1fs2A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.88 | 80.0 | 4.75e-01 | 100.0% | 15.8% |
| 3ogkB01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.85 | 68.0 | 6.74e-01 | 90.0% | 85.4% |
| 4i6jB01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.84 | 70.0 | 6.92e-01 | 100.0% | 90.5% |
| 4by6B00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.82 | 71.0 | 4.66e-01 | 100.0% | 24.7% |
| 2ovrB01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.81 | 69.0 | 5.42e-01 | 100.0% | 47.1% |
| 6m90A01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.81 | 68.0 | 5.19e-01 | 100.0% | 46.5% |
| 3v7dD01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.77 | 66.0 | 4.98e-01 | 100.0% | 42.0% |
| 3l2oB01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.77 | 65.0 | 5.13e-01 | 100.0% | 88.6% |
| 2ixoA02 | 1.20.120.1150 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Phosphotyrosyl phosphate activator, C-terminal lid domain | 0.68 | 50.0 | 3.58e-01 | 97.5% | 27.2% |
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.67 | 54.0 | 4.99e-01 | 100.0% | 91.2% |
| 2i7nA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 55.0 | 3.75e-01 | 100.0% | 40.0% |
| 4e12A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.65 | 55.0 | 4.36e-01 | 100.0% | 74.7% |
| 6rnzA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.56 | 40.0 | 3.50e-01 | 77.5% | 53.0% |
| 6e6oA00 | 1.20.50.10 | Mainly Alpha › Up-down Bundle › Pheromone ER-1 › Pheromone ER-1 | 0.56 | 41.0 | 4.15e-01 | 87.5% | 90.0% |
| 2l9bA00 | 1.25.40.630 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 41.0 | 3.41e-01 | 95.0% | 73.6% |
| 3g7dA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 39.0 | 3.17e-01 | 77.5% | 40.7% |
| 2xcjA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 39.0 | 3.27e-01 | 85.0% | 69.0% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.52 | 38.0 | 3.42e-01 | 87.5% | 55.4% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3569619 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.98 | 84.0 | 7.99e-01 | 90.0% | 86.7% |
| 3672250 | 207.1.1.116 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 | 0.95 | 84.0 | 5.24e-01 | 100.0% | 20.5% |
| None | — | 0.94 | 84.0 | 4.60e-01 | 97.5% | 7.9% | |
| 3437176 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.94 | 86.0 | 7.37e-01 | 100.0% | 66.7% |
| 3331704 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.94 | 85.0 | 7.86e-01 | 100.0% | 80.0% |
| 3939710 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.94 | 86.0 | 7.18e-01 | 100.0% | 61.5% |
| 3189379 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.94 | 85.0 | 7.11e-01 | 100.0% | 61.5% |
| 3665552 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.94 | 85.0 | 4.70e-01 | 100.0% | 8.7% |
| 3442643 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.93 | 85.0 | 4.60e-01 | 100.0% | 6.7% |
| 3171073 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.93 | 84.0 | 5.87e-01 | 100.0% | 34.8% |
| None | — | 0.92 | 83.0 | 4.49e-01 | 100.0% | 6.7% | |
| 3341479 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.92 | 83.0 | 6.79e-01 | 100.0% | 58.6% |
| 3680688 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.92 | 83.0 | 4.63e-01 | 100.0% | 9.9% |
| 3399970 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.92 | 82.0 | 4.92e-01 | 100.0% | 16.7% |
| None | — | 0.92 | 79.0 | 4.39e-01 | 100.0% | 8.4% | |
| 3628631 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.92 | 81.0 | 7.00e-01 | 97.5% | 65.0% |
| 3349711 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.91 | 76.0 | 7.34e-01 | 92.5% | 82.2% |
| 3461050 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.91 | 79.0 | 7.38e-01 | 97.5% | 78.0% |
| 3642624 | 207.1.1.116 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_FBXL15 | 0.91 | 82.0 | 5.04e-01 | 100.0% | 20.0% |
| 3215528 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.91 | 76.0 | 7.08e-01 | 97.5% | 74.0% |
| 3380603 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.91 | 77.0 | 7.42e-01 | 95.0% | 84.4% |
| 3360537 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.90 | 79.0 | 7.95e-01 | 97.5% | 100.0% |
| 3221696 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.90 | 78.0 | 4.42e-01 | 97.5% | 16.0% |
| 3731257 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.90 | 75.0 | 7.50e-01 | 92.5% | 92.5% |
| 3417160 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.90 | 77.0 | 5.71e-01 | 100.0% | 40.0% |
| 3786009 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.90 | 72.0 | 6.99e-01 | 90.0% | 80.0% |
| 3425357 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.90 | 78.0 | 6.20e-01 | 100.0% | 50.0% |
| 3270939 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.89 | 72.0 | 7.23e-01 | 95.0% | 90.0% |
| 3202320 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.89 | 77.0 | 4.33e-01 | 100.0% | 9.3% |
| 3751898 | 145.1.1.32 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box_4 | 0.89 | 76.0 | 6.33e-01 | 100.0% | 55.7% |
| 4017103 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.89 | 77.0 | 4.40e-01 | 100.0% | 10.8% |
| 3726840 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.89 | 74.0 | 6.03e-01 | 100.0% | 50.7% |
| 1807269 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 76.0 | 7.19e-01 | 97.5% | 81.2% |
| 3617852 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 78.0 | 6.45e-01 | 100.0% | 58.6% |
| 3355293 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 78.0 | 5.73e-01 | 100.0% | 42.0% |
| 3446581 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 79.0 | 6.07e-01 | 100.0% | 49.4% |
| 3173927 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 75.0 | 7.26e-01 | 100.0% | 86.7% |
| 3991892 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.87 | 79.0 | 4.34e-01 | 100.0% | 8.1% |
| 3230376 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.87 | 77.0 | 4.26e-01 | 100.0% | 14.3% |
| 3687689 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.87 | 77.0 | 4.43e-01 | 100.0% | 11.8% |
| 3675534 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.87 | 77.0 | 6.10e-01 | 100.0% | 51.2% |
| 3217628 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.87 | 70.0 | 7.10e-01 | 92.5% | 92.5% |
| 3213262 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.87 | 70.0 | 5.26e-01 | 100.0% | 37.0% |
| 3189161 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.87 | 73.0 | 4.11e-01 | 100.0% | 8.9% |
| 3238357 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.87 | 67.0 | 7.03e-01 | 85.0% | 100.0% |
| 3547224 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.87 | 76.0 | 5.94e-01 | 100.0% | 49.4% |
| 3259075 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.87 | 76.0 | 6.09e-01 | 100.0% | 51.3% |
| 3935864 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.87 | 77.0 | 4.26e-01 | 100.0% | 14.0% |
| 3837286 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.86 | 76.0 | 5.79e-01 | 100.0% | 45.6% |
| 3655623 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.86 | 78.0 | 5.48e-01 | 100.0% | 35.7% |
| 3420610 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.86 | 75.0 | 6.77e-01 | 100.0% | 76.4% |
| 3337545 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.86 | 77.0 | 6.47e-01 | 100.0% | 64.6% |
| 3214169 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.86 | 73.0 | 7.09e-01 | 97.5% | 86.7% |
| 3227830 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.86 | 70.0 | 7.02e-01 | 97.5% | 92.5% |
| 3812507 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.86 | 76.0 | 5.73e-01 | 100.0% | 67.7% |
| 3239444 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.86 | 67.0 | 6.78e-01 | 87.5% | 87.5% |
| 3186415 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.85 | 75.0 | 5.83e-01 | 100.0% | 83.5% |
| 3323668 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.85 | 74.0 | 6.01e-01 | 100.0% | 56.0% |
| 3459106 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.85 | 68.0 | 6.59e-01 | 97.5% | 80.0% |
| 3501462 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.85 | 73.0 | 7.35e-01 | 100.0% | 95.0% |
| 3245517 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.85 | 68.0 | 6.82e-01 | 90.0% | 100.0% |
| 3311874 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.84 | 73.0 | 5.96e-01 | 100.0% | 54.7% |
| 3346715 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.84 | 72.0 | 5.93e-01 | 100.0% | 54.7% |
| 3816886 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.84 | 74.0 | 4.39e-01 | 100.0% | 32.9% |
| 3724474 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.84 | 70.0 | 3.92e-01 | 100.0% | 8.1% |
| 3411800 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.84 | 65.0 | 6.56e-01 | 90.0% | 90.0% |
| 3688419 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.84 | 68.0 | 6.81e-01 | 95.0% | 92.5% |
| 3866275 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.84 | 73.0 | 4.15e-01 | 100.0% | 10.2% |
| 3646855 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.83 | 71.0 | 6.92e-01 | 100.0% | 93.3% |
| 3524044 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.83 | 71.0 | 6.89e-01 | 97.5% | 86.7% |
| 3184741 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.83 | 72.0 | 5.22e-01 | 100.0% | 37.3% |
| 3613821 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.83 | 72.0 | 6.02e-01 | 100.0% | 60.0% |
| 3389442 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.82 | 72.0 | 6.95e-01 | 100.0% | 88.9% |
| 3245275 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.82 | 70.0 | 7.05e-01 | 100.0% | 97.5% |
| 3250931 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.82 | 70.0 | 5.76e-01 | 100.0% | 82.7% |
| 3470430 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.82 | 70.0 | 7.01e-01 | 97.5% | 97.5% |
| 3490408 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.82 | 70.0 | 4.99e-01 | 100.0% | 34.2% |
| 3721004 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.81 | 65.0 | 5.09e-01 | 92.5% | 44.4% |
| 3792735 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.81 | 69.0 | 3.94e-01 | 100.0% | 10.5% |
| 3477761 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.81 | 69.0 | 5.45e-01 | 100.0% | 48.2% |
| 3299128 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.81 | 69.0 | 5.20e-01 | 100.0% | 41.0% |
| 3273645 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.80 | 68.0 | 5.50e-01 | 100.0% | 51.2% |
| 3816173 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.78 | 66.0 | 3.74e-01 | 100.0% | 10.2% |
| 3227162 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.78 | 64.0 | 6.47e-01 | 92.5% | 95.0% |
| 3223791 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.78 | 66.0 | 5.88e-01 | 100.0% | 73.3% |
| 3927351 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.78 | 67.0 | 6.51e-01 | 100.0% | 95.6% |
| 4593317 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.77 | 65.0 | 5.78e-01 | 100.0% | 73.3% |
| 3272640 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.77 | 64.0 | 3.90e-01 | 100.0% | 14.6% |
| 3242739 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.76 | 64.0 | 6.08e-01 | 100.0% | 84.0% |
| 3222836 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.76 | 59.0 | 5.91e-01 | 100.0% | 90.0% |
| 3466008 | 207.1.1.96 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At1g61320_AtMIF1 | 0.75 | 60.0 | 3.46e-01 | 100.0% | 9.2% |
| 3491877 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.74 | 61.0 | 4.11e-01 | 100.0% | 26.3% |
| 3229045 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.73 | 60.0 | 4.66e-01 | 100.0% | 41.1% |
| 3226289 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.73 | 60.0 | 6.00e-01 | 100.0% | 95.0% |
| 3223353 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.73 | 57.0 | 5.74e-01 | 100.0% | 92.5% |
| 3216313 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.72 | 56.0 | 5.68e-01 | 90.0% | 92.5% |
| 3228948 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.72 | 59.0 | 5.93e-01 | 100.0% | 97.5% |
| 4028410 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.71 | 61.0 | 5.55e-01 | 100.0% | 94.5% |
| 3236656 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.70 | 59.0 | 4.13e-01 | 100.0% | 30.7% |
| 3244551 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.69 | 53.0 | 5.37e-01 | 95.0% | 92.5% |
D2
medium
residues 59-106_135-294_311-341
Domain cluster:
rep: ankyrin_repeat_domain__YP_008438136__Pandoravirus_salinus__1349410__D147-342
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2fo1E00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.69 | 51.0 | 4.68e-01 | 74.9% | 64.3% |
| 1iknD00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.68 | 50.0 | 5.32e-01 | 97.1% | 84.2% |
| 1n11A00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.65 | 53.0 | 4.35e-01 | 86.6% | 50.0% |
| 4uucA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.64 | 50.0 | 5.20e-01 | 95.0% | 86.4% |
| 3eu9C00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.62 | 50.0 | 5.15e-01 | 95.0% | 87.6% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3275803 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.82 | 52.0 | 4.20e-01 | 73.6% | 37.1% |
| 3255754 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.71 | 52.0 | 4.19e-01 | 74.1% | 46.8% |
| 4001612 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.70 | 43.0 | 5.26e-01 | 75.3% | 92.5% |
| 3259553 | 109.3.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 | 0.69 | 51.0 | 4.64e-01 | 75.3% | 80.0% |
| 3909281 | 109.3.1.96 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 | 0.68 | 49.0 | 5.61e-01 | 73.6% | 96.2% |
| 3677284 | 109.4.1.1285 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif | 0.61 | 47.0 | 3.28e-01 | 79.1% | 38.2% |
| 3825062 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.58 | 44.0 | 3.62e-01 | 78.7% | 54.3% |
| 3451428 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.57 | 42.0 | 4.30e-01 | 75.3% | 87.2% |
| 3356213 | 109.4.1.1261 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_long | 0.57 | 41.0 | 3.81e-01 | 73.6% | 82.6% |
| 3724031 | 109.3.1.8 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 | 0.56 | 44.0 | 4.48e-01 | 95.4% | 82.6% |
| 3663676 | 109.4.1.2646 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long, E_motif, TPR_24 | 0.54 | 45.0 | 3.05e-01 | 97.5% | 24.0% |
| 3876695 | 109.3.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 | 0.53 | 47.0 | 3.93e-01 | 95.0% | 57.1% |
| 3276045 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.53 | 45.0 | 2.87e-01 | 88.7% | 75.7% |