←Back to structures
F-box_domain_containing_protein
Euk-VirPandoravirus_quercus
F-box_domain_containing_protein__YP_009483212__Pandoravirus_quercus__2107709
Identity
- Accession:
- YP_009483212 ↗
- Protein ID:
- F-box_domain_containing_protein
- Kingdom:
- euk
Quality
67.2
mean pLDDT
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-71
D2
high
residues 86-222
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.58 | 27.0 | 3.53e-01 | 74.5% | 77.5% |
| 1v1cA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 29.0 | 3.90e-01 | 91.2% | 100.0% |
| 1vw4M01 | 2.30.30.790 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 41.0 | 4.19e-01 | 94.2% | 82.6% |
| 4innA00 | 2.40.128.520 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 37.0 | 3.69e-01 | 73.0% | 92.5% |
| 3apuB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 39.0 | 3.68e-01 | 81.0% | 97.1% |
| 1srqA01 | 3.30.1120.160 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.51 | 40.0 | 4.02e-01 | 92.0% | 83.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3195739 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.69 | 50.0 | 5.13e-01 | 93.4% | 77.7% |
| 3635276 | 219.1.1.93 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6540 | 0.66 | 50.0 | 5.08e-01 | 92.0% | 80.7% |
| 5032977 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 37.0 | 4.71e-01 | 92.7% | 98.8% |
| 3530891 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 43.0 | 4.72e-01 | 81.0% | 94.5% |
| 3241959 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.58 | 41.0 | 4.43e-01 | 92.7% | 86.1% |
| 3718300 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 23.0 | 3.01e-01 | 92.0% | 64.0% |
| 3273306 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.54 | 40.0 | 3.94e-01 | 91.2% | 70.0% |
| 3167531 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.54 | 41.0 | 4.16e-01 | 94.2% | 80.7% |
| 3496143 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.52 | 43.0 | 4.22e-01 | 91.2% | 84.1% |
| 3432877 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 26.0 | 3.42e-01 | 89.1% | 100.0% |
| 4950222 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.50 | 38.0 | 4.15e-01 | 78.1% | 97.3% |