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F-box_domain_containing_protein
Euk-VirPandoravirus_quercus
F-box_domain_containing_protein__YP_009483438__Pandoravirus_quercus__2107709
Identity
- Accession:
- YP_009483438 ↗
- Protein ID:
- F-box_domain_containing_protein
- Kingdom:
- euk
Quality
72.9
mean pLDDT
Cluster
View cluster (16 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 321-376
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vpwA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 39.0 | 3.90e-01 | 98.2% | 64.9% |
| 1irzA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.52 | 42.0 | 4.09e-01 | 91.1% | 85.9% |
| 1ntcA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.51 | 34.0 | 3.04e-01 | 71.4% | 49.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3092428 | 101.1.1.86 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Raf1_HTH | 0.63 | 43.0 | 3.84e-01 | 94.6% | 48.2% |
| 3342407 | 109.4.1.1330 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_3, PPR_long | 0.62 | 46.0 | 2.83e-01 | 80.4% | 14.6% |
| 3818350 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.61 | 51.0 | 3.30e-01 | 94.6% | 49.4% |
| 4203279 | 2498.1.1.62 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M76 | 0.58 | 41.0 | 2.83e-01 | 94.6% | 18.8% |
| 3501482 | 102.1.1.41 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › EME1-MUS81_C | 0.58 | 48.0 | 3.99e-01 | 100.0% | 72.5% |
| 5034596 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 50.0 | 3.79e-01 | 100.0% | 92.6% |
| 4505130 | 2484.1.1.174 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH | 0.54 | 40.0 | 3.14e-01 | 80.4% | 80.0% |
| 3802794 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.51 | 41.0 | 3.02e-01 | 98.2% | 75.6% |
| 3722734 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 39.0 | 2.60e-01 | 92.9% | 40.0% |
| 3303024 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.50 | 38.0 | 3.65e-01 | 92.9% | 70.0% |