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F-box_domain_containing_protein
Euk-VirPandoravirus_quercus
F-box_domain_containing_protein__YP_009483598__Pandoravirus_quercus__2107709
Identity
- Accession:
- YP_009483598 ↗
- Protein ID:
- F-box_domain_containing_protein
- Kingdom:
- euk
Quality
80.3
mean pLDDT
Cluster
View cluster (22 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 63-223
D2
medium
residues 280-383
Domain cluster:
rep: Morn_repeat_protein__YP_009119821__Pandoravirus_inopinatum__1605721__D361-382_400-503
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fhoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 40.0 | 3.86e-01 | 87.5% | 69.7% |
| 1yy3A02 | 2.40.10.240 | Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like | 0.53 | 32.0 | 3.31e-01 | 96.2% | 61.6% |
| 1nkgA01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.50 | 43.0 | 3.29e-01 | 94.2% | 94.4% |
| 3rf9B02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.50 | 40.0 | 2.98e-01 | 87.5% | 94.4% |
| 2rs7A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 31.0 | 3.49e-01 | 74.0% | 85.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3406570 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.65 | 39.0 | 3.89e-01 | 76.9% | 58.1% |
| 3965131 | 77.1.1.0 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein | 0.59 | 36.0 | 3.81e-01 | 76.9% | 68.9% |
| 3922383 | 79.1.1.27 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › MORN | 0.57 | 41.0 | 4.53e-01 | 97.1% | 91.8% |
| 3600402 | 77.2.1.0 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N | 0.57 | 40.0 | 2.69e-01 | 79.8% | 19.2% |
| 3699495 | 3523.1.1.4 ↗ | beta meanders › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › Periplasmic lipopolysaccharide transport protein LptA (YhbN) › MORN | 0.56 | 33.0 | 3.86e-01 | 76.9% | 85.7% |
| 3598916 | 77.2.1.0 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N | 0.56 | 42.0 | 3.52e-01 | 79.8% | 53.3% |
| 3611128 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.55 | 39.0 | 2.47e-01 | 79.8% | 14.9% |
| 4946245 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.55 | 31.0 | 3.81e-01 | 76.9% | 100.0% |
| 5024720 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.55 | 32.0 | 3.75e-01 | 95.2% | 87.7% |
| 3350809 | 77.1.1.5 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN | 0.54 | 35.0 | 3.73e-01 | 72.1% | 73.7% |