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F-box_domain_protein
Euk-VirPandoravirus_inopinatum
F-box_domain_protein__YP_009119061__Pandoravirus_inopinatum__1605721
Identity
- Accession:
- YP_009119061 ↗
- Protein ID:
- F-box_domain_protein
- Kingdom:
- euk
Quality
70.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 15-155
D2
medium
residues 156-298
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jb9F00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 29.0 | 3.78e-01 | 92.3% | 73.2% |
| 2lmcB00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.59 | 20.0 | 2.92e-01 | 84.6% | 63.9% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 22.0 | 3.29e-01 | 80.4% | 78.7% |
| 3fqmA01 | 2.20.25.210 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C NS5A, domain 1B | 0.57 | 22.0 | 3.16e-01 | 89.5% | 75.4% |
| 6asoH00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 28.0 | 3.60e-01 | 93.7% | 79.5% |
| 6guuA01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 21.0 | 3.17e-01 | 79.7% | 85.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5043415 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.62 | 41.0 | 4.41e-01 | 90.2% | 77.5% |
| 3920359 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.55 | 31.0 | 3.22e-01 | 85.3% | 57.8% |
| 3664331 | 77.3.1.3 ↗ | beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › MORN | 0.53 | 29.0 | 3.13e-01 | 85.3% | 60.8% |
| 4606694 | 4099.1.1.26 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Kre28 | 0.51 | 28.0 | 3.50e-01 | 88.1% | 90.4% |