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F-box_domain_protein
Euk-VirPandoravirus_inopinatum
F-box_domain_protein__YP_009119256__Pandoravirus_inopinatum__1605721
Identity
- Accession:
- YP_009119256 ↗
- Protein ID:
- F-box_domain_protein
- Kingdom:
- euk
Quality
64.9
mean pLDDT
Cluster
View cluster (18 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 63-133
Domain cluster:
rep: F-box_domain_containing_protein__YP_009482098__Pandoravirus_neocaledonia__2107708__D2-71
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12937.13 best | F-box-like | 25.0 | 1.70e-05 | 66.2% | 80.8% |
D2
high
residues 137-267_280-296
Domain cluster:
rep: F-box_domain__YP_008437518__Pandoravirus_salinus__1349410__D88-201
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3jyuA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.73 | 43.0 | 5.34e-01 | 87.8% | 94.4% |
| 1wmhB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.73 | 41.0 | 5.36e-01 | 85.8% | 98.8% |
| 1v6eA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.72 | 40.0 | 5.27e-01 | 85.1% | 100.0% |
| 1gg3A02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.72 | 39.0 | 5.15e-01 | 84.5% | 98.7% |
| 1oeyA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.71 | 39.0 | 5.05e-01 | 85.1% | 95.1% |
| 2kanA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.71 | 37.0 | 4.97e-01 | 85.8% | 100.0% |
| 5c6dA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.71 | 44.0 | 5.01e-01 | 87.2% | 84.1% |
| 1c1yB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.70 | 37.0 | 5.09e-01 | 85.8% | 100.0% |
| 2kmaA02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.68 | 39.0 | 5.02e-01 | 91.9% | 100.0% |
| 3pz8C00 | 2.40.240.130 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › | 0.68 | 38.0 | 5.04e-01 | 87.2% | 100.0% |
| 1wgyA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.68 | 36.0 | 4.82e-01 | 85.1% | 100.0% |
| 1wjnA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.68 | 41.0 | 4.95e-01 | 91.9% | 91.8% |
| 2kc1A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.66 | 38.0 | 4.64e-01 | 85.8% | 90.1% |
| 2dnfA01 | 3.10.20.230 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Doublecortin domain | 0.66 | 36.0 | 4.40e-01 | 87.2% | 85.4% |
| 2qejD01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.65 | 43.0 | 4.83e-01 | 85.8% | 83.9% |
| 2m4nA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.64 | 43.0 | 4.96e-01 | 84.5% | 93.5% |
| 3ddcB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.63 | 42.0 | 4.39e-01 | 84.5% | 74.4% |
| 3au4A02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.62 | 39.0 | 4.76e-01 | 87.2% | 97.9% |
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.54 | 22.0 | 3.17e-01 | 81.1% | 85.0% |
| 2kdvA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.53 | 35.0 | 3.45e-01 | 87.2% | 61.0% |
| 1qtqA02 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.53 | 30.0 | 3.66e-01 | 85.8% | 88.9% |
| 2wpgA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.52 | 25.0 | 3.30e-01 | 84.5% | 86.7% |
| 2l52A00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.51 | 33.0 | 3.94e-01 | 88.5% | 98.0% |
ECOD (74)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3422649 | 221.1.1.166 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF26130 | 0.75 | 50.0 | 5.71e-01 | 85.1% | 90.9% |
| 3425523 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.73 | 42.0 | 5.28e-01 | 88.5% | 93.3% |
| 3600134 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.73 | 49.0 | 5.82e-01 | 86.5% | 100.0% |
| 3889375 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.73 | 42.0 | 5.39e-01 | 86.5% | 100.0% |
| 3406765 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.73 | 43.0 | 5.23e-01 | 87.8% | 90.5% |
| 3178077 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.72 | 40.0 | 5.23e-01 | 85.1% | 100.0% |
| 3605638 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.71 | 40.0 | 5.11e-01 | 91.2% | 95.3% |
| 3781061 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.71 | 41.0 | 5.17e-01 | 87.2% | 97.6% |
| 3936525 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.70 | 48.0 | 5.72e-01 | 86.5% | 99.0% |
| 2448270 | 221.1.1.33 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DWNN | 0.70 | 40.0 | 4.93e-01 | 91.9% | 92.0% |
| 3592612 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.70 | 38.0 | 5.03e-01 | 83.1% | 97.5% |
| 3893651 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.70 | 49.0 | 5.19e-01 | 87.8% | 80.8% |
| 3707940 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.69 | 46.0 | 5.46e-01 | 93.2% | 100.0% |
| 3573560 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.69 | 44.0 | 5.22e-01 | 87.2% | 94.0% |
| 3262814 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.69 | 42.0 | 5.10e-01 | 92.6% | 93.7% |
| 3241250 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.69 | 45.0 | 5.27e-01 | 88.5% | 93.3% |
| 3928168 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.69 | 47.0 | 5.47e-01 | 85.8% | 97.1% |
| 3212416 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.69 | 42.0 | 5.23e-01 | 86.5% | 100.0% |
| 3457365 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.69 | 44.0 | 4.99e-01 | 90.5% | 85.5% |
| 3743326 | 221.1.1.51 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_C2 | 0.69 | 40.0 | 4.93e-01 | 85.8% | 93.3% |
| 3637520 | 221.1.1.52 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 | 0.68 | 43.0 | 4.93e-01 | 87.8% | 87.6% |
| 3932396 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.68 | 46.0 | 5.44e-01 | 86.5% | 98.1% |
| 3358195 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.68 | 42.0 | 4.69e-01 | 87.8% | 79.1% |
| 3788358 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.67 | 45.0 | 5.32e-01 | 92.6% | 100.0% |
| 3220610 | 221.1.1.202 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF30122 | 0.67 | 42.0 | 5.13e-01 | 85.8% | 97.9% |
| 3528684 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.67 | 41.0 | 4.98e-01 | 85.8% | 95.8% |
| 3794509 | 221.1.1.119 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP47_C | 0.67 | 46.0 | 4.93e-01 | 87.8% | 82.4% |
| 4658615 | 221.1.1.28 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › SOK | 0.66 | 42.0 | 5.11e-01 | 87.2% | 97.9% |
| 4125261 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.66 | 42.0 | 5.15e-01 | 92.6% | 100.0% |
| 3426937 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.66 | 48.0 | 3.24e-01 | 90.5% | 20.8% |
| 3275391 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.66 | 44.0 | 4.95e-01 | 87.2% | 90.0% |
| 3429643 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.65 | 43.0 | 4.98e-01 | 85.8% | 93.3% |
| 3736625 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.65 | 45.0 | 5.21e-01 | 93.9% | 99.0% |
| 3794507 | 221.1.1.99 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UCH | 0.65 | 48.0 | 3.25e-01 | 95.9% | 21.1% |
| 3481704 | 221.1.1.59 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_4 | 0.65 | 43.0 | 4.90e-01 | 94.6% | 90.0% |
| 3472430 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.65 | 45.0 | 4.93e-01 | 85.1% | 86.7% |
| 3507289 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.65 | 43.0 | 4.53e-01 | 85.8% | 74.6% |
| 3204107 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.65 | 50.0 | 5.44e-01 | 88.5% | 98.3% |
| 3581133 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.65 | 44.0 | 4.95e-01 | 87.8% | 89.6% |
| 3938251 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.65 | 39.0 | 4.53e-01 | 87.2% | 83.8% |
| 3697897 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.65 | 49.0 | 5.15e-01 | 91.9% | 89.2% |
| 3455763 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.65 | 46.0 | 5.25e-01 | 89.9% | 99.1% |
| 3461367 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.64 | 41.0 | 4.92e-01 | 87.2% | 100.0% |
| 3585975 | 221.1.1.55 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RAWUL | 0.63 | 43.0 | 4.91e-01 | 85.8% | 92.7% |
| 3491560 | 221.1.1.36 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_N | 0.63 | 39.0 | 4.78e-01 | 88.5% | 100.0% |
| 3405569 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.63 | 41.0 | 4.71e-01 | 93.9% | 89.1% |
| 3926362 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.63 | 44.0 | 4.86e-01 | 88.5% | 89.2% |
| 3453549 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.63 | 47.0 | 5.17e-01 | 92.6% | 100.0% |
| 3601248 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.62 | 41.0 | 4.92e-01 | 86.5% | 99.0% |
| 3998999 | 221.1.1.87 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_N_2 | 0.62 | 40.0 | 4.71e-01 | 85.8% | 94.0% |
| 3218873 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.62 | 45.0 | 4.97e-01 | 87.8% | 95.7% |
| 3248429 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 40.0 | 4.76e-01 | 84.5% | 99.0% |
| 3606053 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 48.0 | 5.07e-01 | 87.8% | 97.6% |
| 3800190 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 40.0 | 4.68e-01 | 91.9% | 100.0% |
| 3722291 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 50.0 | 5.23e-01 | 98.6% | 100.0% |
| 3722467 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 38.0 | 4.54e-01 | 82.4% | 98.0% |
| 3513812 | 221.1.1.67 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Plexin_RBD | 0.58 | 45.0 | 4.28e-01 | 93.9% | 69.4% |
| 3479715 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 41.0 | 4.69e-01 | 99.3% | 98.2% |
| 3628070 | 221.1.1.2 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin | 0.58 | 40.0 | 4.64e-01 | 85.8% | 99.0% |
| 3736624 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.58 | 46.0 | 3.20e-01 | 95.9% | 24.6% |
| 3913928 | 221.1.1.163 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › GRHL1_C | 0.58 | 39.0 | 4.37e-01 | 91.9% | 90.9% |
| 3940884 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 47.0 | 4.94e-01 | 93.2% | 96.3% |
| 3816078 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 39.0 | 4.25e-01 | 85.8% | 84.2% |
| 3254595 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 37.0 | 4.47e-01 | 87.8% | 100.0% |
| 3740838 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 45.0 | 4.78e-01 | 90.5% | 93.8% |
| 3694201 | 221.1.1.46 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg | 0.57 | 45.0 | 4.71e-01 | 95.3% | 92.6% |
| 4023494 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 41.0 | 4.49e-01 | 86.5% | 92.5% |
| 3593894 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 40.0 | 4.10e-01 | 85.1% | 75.9% |
| 3941016 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.55 | 39.0 | 4.11e-01 | 86.5% | 80.0% |
| 3616831 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.55 | 38.0 | 4.21e-01 | 86.5% | 89.2% |
| 3596353 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 42.0 | 4.58e-01 | 95.9% | 96.8% |
| 3719864 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 38.0 | 4.29e-01 | 85.8% | 100.0% |
| 3258431 | 221.17.1.2 ↗ | a+b two layers › beta-Grasp › C-terminal wheel domain of Cns1 › C-terminal wheel domain of Cns1 › BCD1 | 0.52 | 42.0 | 4.00e-01 | 100.0% | 72.9% |
| 3711375 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.50 | 39.0 | 2.81e-01 | 84.5% | 65.9% |