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F-box_domain_protein
Euk-VirPandoravirus_inopinatum
F-box_domain_protein__YP_009119927__Pandoravirus_inopinatum__1605721
Identity
- Accession:
- YP_009119927 ↗
- Protein ID:
- F-box_domain_protein
- Kingdom:
- euk
Quality
66.3
mean pLDDT
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 59-105
Domain cluster:
rep: F-box_domain_protein__YP_009119184__Pandoravirus_inopinatum__1605721__D1-51
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12937.13 best | F-box-like | 27.0 | 4.40e-06 | 91.5% | 89.4% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4i6jB01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.87 | 64.0 | 6.75e-01 | 78.7% | 88.1% |
| 1fs2A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.87 | 70.0 | 4.29e-01 | 89.4% | 15.8% |
| 2p1oB01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.87 | 63.0 | 6.87e-01 | 78.7% | 94.7% |
| 3l2oB01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.87 | 77.0 | 6.24e-01 | 100.0% | 54.5% |
| 3ogkB01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.83 | 57.0 | 6.02e-01 | 78.7% | 82.9% |
| 2ovrB01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.83 | 69.0 | 5.69e-01 | 95.7% | 51.7% |
| 6m90A01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.83 | 72.0 | 5.68e-01 | 100.0% | 52.5% |
| 5ibkB00 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.82 | 63.0 | 6.39e-01 | 85.1% | 84.8% |
| 2e31A01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.80 | 67.0 | 6.23e-01 | 97.9% | 79.0% |
| 3v7dD01 | 1.20.1280.50 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.79 | 66.0 | 5.24e-01 | 97.9% | 49.0% |
| 4by6B00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.68 | 52.0 | 3.62e-01 | 87.2% | 24.7% |
| 4c0dC00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.65 | 49.0 | 3.55e-01 | 87.2% | 28.2% |
| 3d5lA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 48.0 | 4.71e-01 | 83.0% | 100.0% |
| 2kjgA00 | 1.20.120.970 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.61 | 50.0 | 4.05e-01 | 100.0% | 61.6% |
| 3s5wA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 49.0 | 2.83e-01 | 89.4% | 30.7% |
| 4h59A02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.59 | 39.0 | 2.77e-01 | 100.0% | 19.3% |
| 1g4uS01 | 1.20.120.260 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Virulence factor YopE uncharacterised domain | 0.58 | 47.0 | 3.48e-01 | 93.6% | 33.9% |
| 6v88A00 | 3.30.710.10 | Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A | 0.58 | 43.0 | 3.38e-01 | 87.2% | 79.3% |
| 4i9oA00 | 1.10.246.20 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain | 0.56 | 35.0 | 3.03e-01 | 74.5% | 38.5% |
| 6q9jB02 | 1.20.1440.230 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain | 0.56 | 40.0 | 3.48e-01 | 85.1% | 96.6% |
| 1f2eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 41.0 | 3.34e-01 | 100.0% | 69.8% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3348915 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.96 | 87.0 | 6.41e-01 | 97.9% | 41.8% |
| 3524044 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.95 | 73.0 | 7.48e-01 | 80.9% | 84.4% |
| 3730054 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.95 | 88.0 | 7.58e-01 | 100.0% | 67.1% |
| 3472074 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.95 | 86.0 | 6.65e-01 | 97.9% | 48.4% |
| 3660193 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.95 | 78.0 | 7.64e-01 | 87.2% | 82.0% |
| 3886321 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.95 | 87.0 | 7.05e-01 | 97.9% | 57.5% |
| 3321220 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.95 | 71.0 | 7.59e-01 | 78.7% | 92.5% |
| 3261282 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.94 | 85.0 | 8.07e-01 | 97.9% | 83.6% |
| 3711287 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.94 | 83.0 | 6.25e-01 | 95.7% | 43.3% |
| 3861026 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.94 | 85.0 | 6.52e-01 | 97.9% | 48.0% |
| 3407033 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.94 | 85.0 | 7.10e-01 | 97.9% | 62.7% |
| 3876177 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.92 | 74.0 | 6.17e-01 | 93.6% | 53.3% |
| 4000706 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.92 | 70.0 | 6.92e-01 | 80.9% | 76.0% |
| 3802856 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.92 | 83.0 | 7.86e-01 | 100.0% | 85.5% |
| 3547224 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.92 | 82.0 | 6.63e-01 | 97.9% | 55.3% |
| 3250247 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.91 | 80.0 | 7.31e-01 | 95.7% | 75.0% |
| 3664299 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.91 | 83.0 | 6.45e-01 | 100.0% | 49.5% |
| 3730967 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.91 | 82.0 | 6.22e-01 | 100.0% | 45.7% |
| 3770072 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.91 | 83.0 | 6.54e-01 | 100.0% | 52.2% |
| 3250931 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.91 | 82.0 | 6.86e-01 | 97.9% | 62.7% |
| 3903969 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.91 | 81.0 | 6.39e-01 | 97.9% | 52.2% |
| 3209791 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.91 | 82.0 | 7.22e-01 | 97.9% | 72.3% |
| 3758711 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.90 | 67.0 | 7.15e-01 | 78.7% | 92.5% |
| 3420610 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.90 | 81.0 | 7.69e-01 | 100.0% | 83.6% |
| 4023099 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.90 | 80.0 | 5.86e-01 | 97.9% | 40.0% |
| 3194125 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.90 | 79.0 | 6.57e-01 | 97.9% | 57.5% |
| 4135389 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.90 | 66.0 | 5.74e-01 | 78.7% | 52.9% |
| 3845951 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.90 | 79.0 | 6.44e-01 | 97.9% | 55.3% |
| 3903644 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.90 | 65.0 | 5.92e-01 | 76.6% | 60.0% |
| 3613821 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.90 | 80.0 | 6.91e-01 | 97.9% | 65.7% |
| 3248494 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.90 | 79.0 | 7.05e-01 | 97.9% | 72.3% |
| 3415320 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.89 | 67.0 | 5.83e-01 | 80.9% | 54.3% |
| 3461596 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.89 | 78.0 | 6.75e-01 | 97.9% | 64.3% |
| 3355293 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.89 | 78.0 | 6.04e-01 | 97.9% | 47.0% |
| 3669426 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.89 | 71.0 | 7.44e-01 | 87.2% | 95.3% |
| 3698023 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.89 | 78.0 | 5.77e-01 | 97.9% | 40.9% |
| 4073598 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.89 | 79.0 | 7.01e-01 | 97.9% | 73.8% |
| 3446581 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 78.0 | 6.33e-01 | 97.9% | 55.3% |
| 3245054 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 78.0 | 7.42e-01 | 97.9% | 85.5% |
| 3331906 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 67.0 | 6.63e-01 | 80.9% | 76.0% |
| 4022899 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 79.0 | 6.12e-01 | 100.0% | 48.0% |
| 3208443 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 77.0 | 5.80e-01 | 97.9% | 42.9% |
| 3902311 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 79.0 | 6.41e-01 | 100.0% | 55.3% |
| 3726578 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 76.0 | 6.25e-01 | 97.9% | 56.5% |
| 3485475 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 76.0 | 6.19e-01 | 95.7% | 54.1% |
| 3301272 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 77.0 | 5.77e-01 | 97.9% | 42.7% |
| 3833527 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 74.0 | 6.82e-01 | 93.6% | 73.3% |
| 3837673 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 65.0 | 6.66e-01 | 85.1% | 82.2% |
| 3259844 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.88 | 71.0 | 7.04e-01 | 89.4% | 84.0% |
| 4011985 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.88 | 76.0 | 6.07e-01 | 97.9% | 50.0% |
| 3490408 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 76.0 | 5.60e-01 | 97.9% | 61.7% |
| 3257387 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.88 | 76.0 | 6.24e-01 | 97.9% | 54.1% |
| 3458366 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.87 | 72.0 | 7.36e-01 | 91.5% | 95.6% |
| 3854754 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.87 | 66.0 | 7.03e-01 | 87.2% | 95.0% |
| 3783078 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.87 | 78.0 | 5.27e-01 | 100.0% | 84.2% |
| 3451260 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.87 | 77.0 | 7.11e-01 | 100.0% | 80.0% |
| 3726840 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.87 | 77.0 | 6.52e-01 | 97.9% | 61.3% |
| 3311102 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.87 | 67.0 | 7.14e-01 | 87.2% | 97.5% |
| 3531870 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.87 | 64.0 | 6.29e-01 | 78.7% | 76.0% |
| 3184741 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.87 | 78.0 | 5.86e-01 | 100.0% | 44.5% |
| 3810074 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.87 | 77.0 | 6.44e-01 | 100.0% | 59.5% |
| 4021336 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.87 | 78.0 | 7.16e-01 | 100.0% | 81.7% |
| 3810743 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.87 | 77.0 | 4.80e-01 | 100.0% | 20.0% |
| 3792735 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.87 | 73.0 | 4.23e-01 | 100.0% | 11.6% |
| 3300009 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.87 | 76.0 | 6.26e-01 | 95.7% | 57.5% |
| 3812115 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.86 | 76.0 | 6.57e-01 | 100.0% | 64.4% |
| 3691218 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.86 | 75.0 | 7.10e-01 | 97.9% | 81.8% |
| 3344585 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.86 | 78.0 | 6.94e-01 | 100.0% | 76.9% |
| 3909942 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.86 | 72.0 | 5.50e-01 | 95.7% | 40.9% |
| 3806475 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.86 | 76.0 | 6.49e-01 | 100.0% | 62.7% |
| 3575456 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.86 | 73.0 | 5.87e-01 | 100.0% | 50.0% |
| 3309661 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.86 | 69.0 | 5.72e-01 | 93.6% | 51.2% |
| 3826054 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.86 | 75.0 | 7.18e-01 | 100.0% | 85.5% |
| 3428949 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.85 | 72.0 | 6.88e-01 | 100.0% | 80.0% |
| 3617852 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.85 | 75.0 | 6.52e-01 | 97.9% | 68.6% |
| 3536855 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.85 | 77.0 | 6.04e-01 | 100.0% | 51.6% |
| 4545458 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.85 | 73.0 | 5.71e-01 | 97.9% | 48.0% |
| 3527636 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.85 | 74.0 | 6.02e-01 | 100.0% | 86.5% |
| 3675534 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.85 | 71.0 | 5.94e-01 | 95.7% | 55.0% |
| 3355899 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.84 | 74.0 | 6.05e-01 | 97.9% | 55.3% |
| 3466887 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.84 | 74.0 | 7.27e-01 | 100.0% | 94.0% |
| 3335288 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.84 | 70.0 | 5.28e-01 | 95.7% | 40.0% |
| 3653326 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.84 | 69.0 | 7.06e-01 | 93.6% | 95.6% |
| 3425357 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.84 | 73.0 | 6.10e-01 | 95.7% | 59.0% |
| 3300713 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.84 | 69.0 | 5.90e-01 | 95.7% | 57.3% |
| 3617289 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.84 | 73.0 | 6.80e-01 | 100.0% | 78.3% |
| 3186415 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.84 | 74.0 | 6.07e-01 | 100.0% | 56.5% |
| 3856479 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.83 | 74.0 | 4.18e-01 | 95.7% | 17.3% |
| 3320433 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.83 | 74.0 | 6.81e-01 | 100.0% | 78.3% |
| 3515309 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.83 | 74.0 | 4.30e-01 | 100.0% | 26.4% |
| 3380116 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.82 | 73.0 | 6.46e-01 | 100.0% | 69.1% |
| 3664817 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.82 | 74.0 | 6.09e-01 | 100.0% | 57.5% |
| 3311874 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.82 | 67.0 | 5.81e-01 | 97.9% | 58.7% |
| 3552610 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.81 | 70.0 | 5.97e-01 | 95.7% | 62.2% |
| 3817535 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.81 | 73.0 | 4.28e-01 | 100.0% | 38.6% |
| 3350782 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.81 | 73.0 | 4.34e-01 | 100.0% | 27.1% |
| 3644174 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.81 | 69.0 | 5.91e-01 | 95.7% | 61.3% |
| 3680688 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.79 | 70.0 | 3.98e-01 | 95.7% | 14.8% |
| 3303758 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.79 | 69.0 | 3.72e-01 | 95.7% | 11.1% |
| 3769778 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.77 | 65.0 | 4.05e-01 | 95.7% | 35.5% |
D2
medium
residues 150-201_300-369
D3
medium
residues 202-299
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nnvA01 | 3.10.450.140 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › dsDNA mimic, putative | 0.61 | 43.0 | 4.33e-01 | 99.0% | 72.0% |
| 1ywmA01 | 2.60.500.10 | Mainly Beta › Sandwich › Surface Active Protein fold › Surface Active Protein domain | 0.57 | 39.0 | 3.99e-01 | 73.5% | 70.4% |
| 4boeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 39.0 | 3.45e-01 | 91.8% | 49.4% |
| 2p9rA00 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.52 | 33.0 | 3.34e-01 | 85.7% | 62.7% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4036788 | 222.1.1.12 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH | 0.57 | 44.0 | 3.58e-01 | 81.6% | 66.7% |
| 3243615 | 708.1.1.18 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › DUF7747 | 0.55 | 39.0 | 3.27e-01 | 75.5% | 51.7% |
| 4017019 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.55 | 43.0 | 3.40e-01 | 81.6% | 63.2% |
| 4167075 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.52 | 41.0 | 3.51e-01 | 81.6% | 84.0% |
| 3484299 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 45.0 | 2.93e-01 | 100.0% | 58.0% |
| 3705250 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.50 | 37.0 | 3.04e-01 | 81.6% | 42.2% |
D4
medium
residues 370-390_420-514_594-605
D5
medium
residues 515-555_606-661