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F-box_incomplete_domain
Euk-VirPandoravirus_salinus
F-box_incomplete_domain__YP_008438181__Pandoravirus_salinus__1349410
Identity
- Accession:
- YP_008438181 ↗
- Protein ID:
- F-box_incomplete_domain
- Kingdom:
- euk
Quality
73.0
mean pLDDT
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-80
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF12937.13 best | F-box-like | 27.5 | 2.90e-06 | 56.2% | 87.2% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fs2A00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.64 | 58.0 | 3.99e-01 | 98.8% | 33.6% |
| 2zopA00 | 1.10.520.30 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › AF1862-like domain | 0.54 | 36.0 | 3.35e-01 | 70.0% | 54.5% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3999567 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.74 | 52.0 | 5.05e-01 | 73.8% | 88.9% |
| 3434959 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.73 | 39.0 | 4.96e-01 | 82.5% | 93.3% |
| 3677573 | 207.1.1.134 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, DUF7885 | 0.73 | 55.0 | 3.56e-01 | 100.0% | 18.6% |
| 3319774 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.71 | 46.0 | 4.78e-01 | 70.0% | 70.7% |
| 3916304 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.71 | 52.0 | 5.00e-01 | 76.2% | 93.3% |
| 3309226 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.70 | 48.0 | 4.21e-01 | 70.0% | 85.2% |
| 3448206 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.69 | 45.0 | 5.13e-01 | 87.5% | 96.4% |
| 3807195 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.68 | 53.0 | 5.65e-01 | 98.8% | 95.7% |
| 3934680 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.68 | 42.0 | 5.09e-01 | 71.2% | 100.0% |
| 3928944 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.67 | 42.0 | 5.00e-01 | 71.2% | 100.0% |
| 3720343 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.66 | 43.0 | 4.23e-01 | 91.3% | 62.4% |
| 3725291 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.66 | 56.0 | 5.34e-01 | 92.5% | 77.9% |
| 3439829 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.65 | 52.0 | 5.01e-01 | 86.3% | 92.2% |
| 3465884 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.64 | 48.0 | 5.21e-01 | 96.2% | 100.0% |
| 3816494 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.64 | 47.0 | 2.95e-01 | 96.2% | 14.5% |
| 3191984 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.64 | 55.0 | 5.09e-01 | 95.0% | 75.0% |
| 3390129 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.62 | 55.0 | 3.91e-01 | 97.5% | 40.4% |
| 3437951 | 207.1.1.79 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box | 0.61 | 46.0 | 2.82e-01 | 93.8% | 13.5% |
| None | — | 0.60 | 46.0 | 2.89e-01 | 97.5% | 14.5% | |
| 3418847 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.60 | 48.0 | 3.01e-01 | 100.0% | 16.5% |
| 3337395 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.58 | 46.0 | 2.88e-01 | 100.0% | 15.3% |
| 3441758 | 207.1.1.85 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like | 0.58 | 47.0 | 3.03e-01 | 98.8% | 19.0% |
| 3820274 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.56 | 47.0 | 3.09e-01 | 97.5% | 20.9% |
| 3210389 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.54 | 46.0 | 2.83e-01 | 98.8% | 15.4% |
| 3873597 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.53 | 44.0 | 3.89e-01 | 90.0% | 61.7% |
| 3202188 | 207.1.1.309 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_15 | 0.53 | 44.0 | 2.84e-01 | 100.0% | 42.1% |
| 3835205 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.51 | 44.0 | 2.63e-01 | 93.8% | 96.5% |
| 3683657 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.51 | 45.0 | 4.45e-01 | 96.2% | 95.3% |
| 3660681 | 207.1.1.246 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box_5 | 0.50 | 42.0 | 2.87e-01 | 100.0% | 62.6% |
D2
medium
residues 267-351