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F-box_incomplete_domain

Euk-Vir

Pandoravirus_salinus

F-box_incomplete_domain__YP_008438815__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008438815 ↗
Protein ID:
F-box_incomplete_domain
Kingdom:
euk

Quality

70.8 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 5-70
PDB
Domain cluster: representative
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6m90A01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.70 54.0 4.68e-01 81.8% 82.8%
6tepC02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.66 50.0 3.69e-01 83.3% 31.5%
3v7dD01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.66 53.0 4.63e-01 87.9% 88.0%
3h36A00 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.63 44.0 4.25e-01 75.8% 91.0%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.61 42.0 3.42e-01 72.7% 38.9%
2yqyA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.60 42.0 3.38e-01 72.7% 65.1%
3u4qA02 1.10.274.50 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › 0.59 42.0 3.32e-01 77.3% 50.0%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.58 47.0 4.58e-01 93.9% 100.0%
2pejA00 1.10.1200.210 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Chaperonin-like RbcX 0.56 40.0 3.47e-01 75.8% 64.2%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 3.66e-01 75.8% 94.4%
4dmvA01 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 44.0 4.10e-01 89.4% 82.4%
3rmqA02 6.10.140.1650 Special › Helix non-globular › Helix Hairpins › 0.54 38.0 4.06e-01 77.3% 89.3%
3amjB02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.54 41.0 2.89e-01 80.3% 61.1%
2cvzA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.54 43.0 3.64e-01 97.0% 98.5%
6n2nA01 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.54 40.0 2.99e-01 81.8% 86.0%
4hteA03 1.10.167.30 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › 0.54 37.0 3.56e-01 74.2% 98.8%
1vfiA00 1.10.246.100 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Vanadium-binding protein 2 0.51 37.0 3.31e-01 77.3% 56.8%
3h20A04 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.51 41.0 3.81e-01 95.5% 93.3%
2vmaA00 1.20.81.30 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F 0.51 44.0 3.67e-01 100.0% 54.1%
3ckyA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.51 40.0 3.38e-01 97.0% 97.8%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3440863 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.90 54.0 6.86e-01 72.7% 100.0%
3189958 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 48.0 5.67e-01 71.2% 91.1%
3467883 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.78 61.0 6.38e-01 100.0% 93.3%
3727492 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 49.0 5.68e-01 75.8% 93.3%
3467963 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.77 50.0 5.84e-01 72.7% 95.6%
3259075 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.75 57.0 5.38e-01 80.3% 96.2%
3457876 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.73 50.0 3.57e-01 71.2% 48.3%
3390129 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.72 60.0 4.00e-01 89.4% 25.4%
3640174 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.70 54.0 5.17e-01 81.8% 70.7%
3697864 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.70 60.0 5.11e-01 93.9% 98.1%
3193482 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.69 58.0 5.18e-01 93.9% 92.6%
3728200 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.69 59.0 5.83e-01 93.9% 97.1%
3448206 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.67 49.0 5.24e-01 100.0% 92.7%
4422459 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.66 49.0 4.85e-01 80.3% 74.3%
3326833 633.16.1.0 ↗ alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like 0.66 56.0 5.33e-01 95.5% 92.5%
3877694 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.66 51.0 5.30e-01 83.3% 95.0%
3439829 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.65 59.0 5.27e-01 98.5% 84.4%
4021839 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.65 54.0 5.05e-01 93.9% 100.0%
3785386 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.65 51.0 4.84e-01 87.9% 98.8%
3230101 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.65 57.0 4.23e-01 98.5% 68.2%
3219544 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.65 57.0 3.63e-01 95.5% 24.7%
3881666 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.64 57.0 5.60e-01 100.0% 97.1%
3208423 109.3.1.168 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_5 0.63 55.0 3.25e-01 95.5% 25.0%
3726805 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.63 51.0 5.20e-01 97.0% 92.2%
3228478 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.63 58.0 4.52e-01 100.0% 55.6%
4195318 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.62 55.0 5.40e-01 100.0% 95.7%
4021737 5001.1.1.6 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Bac_rhodopsin 0.61 48.0 3.28e-01 89.4% 35.0%
5005999 247.1.1.1 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.61 52.0 3.47e-01 100.0% 53.4%
3720343 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.58 54.0 4.91e-01 100.0% 96.5%
3683226 109.4.1.1295 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, TPR_24 0.57 48.0 3.23e-01 98.5% 33.7%
3461626 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.57 44.0 4.58e-01 97.0% 91.7%
5065764 601.4.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.56 46.0 4.03e-01 95.5% 65.7%
4990979 7516.1.1.51 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_21 0.54 47.0 2.97e-01 100.0% 66.8%
3710793 109.4.1.16 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PUF 0.53 44.0 3.96e-01 100.0% 78.0%
D2 medium residues 71-220
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7xceA01 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.76 54.0 4.53e-01 96.7% 45.1%
2rfmB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.67 50.0 4.66e-01 98.7% 62.0%
2af7D00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.63 41.0 4.49e-01 74.7% 80.2%
4pdyA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.61 45.0 3.89e-01 76.7% 95.3%
4uucA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.60 54.0 4.73e-01 100.0% 64.7%
3eu9C00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.59 55.0 4.74e-01 100.0% 81.4%
6whbA01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.57 51.0 4.24e-01 100.0% 78.3%
2vyiA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 38.0 4.08e-01 98.0% 80.5%
3twqA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.56 49.0 4.80e-01 100.0% 86.6%
1elrA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.55 40.0 4.21e-01 98.7% 87.5%
4yvoA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 37.0 3.98e-01 88.7% 85.7%
8amzT01 1.25.40.990 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.52 43.0 3.66e-01 98.0% 51.5%
2db0B00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.52 45.0 3.94e-01 97.3% 66.7%
1hh8A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 40.0 3.74e-01 98.0% 64.6%
2of3A00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.51 46.0 3.85e-01 100.0% 75.2%
4o6mA02 1.20.120.1760 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain 0.51 35.0 3.28e-01 70.7% 85.6%
3qvsA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 45.0 3.65e-01 98.0% 71.1%
2wzkA03 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.50 34.0 3.93e-01 70.0% 96.4%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3267273 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.81 53.0 5.97e-01 98.7% 86.1%
3811012 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.69 53.0 4.75e-01 98.7% 58.0%
3275305 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.67 61.0 5.00e-01 99.3% 55.8%
3257096 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.65 58.0 4.03e-01 96.7% 36.7%
3595453 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.64 44.0 3.02e-01 99.3% 19.3%
3190265 109.3.1.11 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_5 0.64 51.0 4.68e-01 84.0% 68.7%
4256934 109.3.1.165 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4, Ank_5 0.59 54.0 3.59e-01 100.0% 26.3%
3195802 109.3.1.186 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_5 0.58 51.0 4.21e-01 99.3% 53.8%
3666210 109.4.1.1273 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3 0.57 47.0 3.02e-01 88.0% 20.6%
3563491 109.4.1.1687 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › AP5B1_N, AP5B1_middle 0.57 51.0 3.37e-01 98.0% 33.9%
3337553 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.56 42.0 4.33e-01 90.7% 81.4%
3406878 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 41.0 4.20e-01 98.0% 79.3%
3355211 109.4.1.775 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.55 48.0 4.12e-01 93.3% 80.0%
3341547 109.4.1.1263 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_16 0.55 40.0 3.17e-01 100.0% 35.9%
3306630 109.4.1.1254 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif 0.54 44.0 3.60e-01 86.7% 51.4%
3808853 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.54 49.0 3.57e-01 100.0% 53.4%
3744895 109.4.1.148 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › EST1_DNA_bind,EST1 0.54 47.0 3.16e-01 98.7% 53.8%
4032059 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 37.0 4.01e-01 98.0% 84.8%
3767750 109.4.1.916 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_COPA_B 0.54 38.0 3.89e-01 94.0% 73.6%
3870769 109.4.1.628 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec7-like_HUS 0.53 46.0 3.07e-01 97.3% 69.8%
4026902 109.4.1.22 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N 0.53 40.0 4.05e-01 96.7% 80.0%
3314808 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.53 43.0 4.34e-01 86.7% 96.7%
3771626 109.4.1.628 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec7-like_HUS 0.53 47.0 3.52e-01 100.0% 70.5%
4890226 109.26.1.6 ↗ alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › TPR_NUP160_120_M 0.53 47.0 3.50e-01 100.0% 50.5%
3324677 109.4.1.1271 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 0.52 46.0 4.36e-01 97.3% 81.1%
3744499 109.4.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nup192 0.52 44.0 3.60e-01 94.0% 72.7%
3705411 109.4.1.777 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 46.0 3.58e-01 100.0% 61.7%
3724557 5069.1.1.0 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes 0.51 38.0 3.61e-01 79.3% 78.9%
3833701 109.4.1.362 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1,TPR_8 0.51 41.0 2.87e-01 98.7% 24.4%
4272244 109.4.1.356 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans 0.50 45.0 3.16e-01 99.3% 36.4%
3350266 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.50 44.0 4.24e-01 96.7% 85.3%
4949192 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.50 38.0 3.85e-01 96.7% 81.9%
D3 medium residues 221-348
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4jgwA02 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.58 45.0 3.64e-01 82.0% 59.2%
2katA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 38.0 3.97e-01 79.7% 73.9%
1w36C06 1.10.10.990 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.57 33.0 4.09e-01 80.5% 100.0%
5fzsA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.56 43.0 4.64e-01 92.2% 98.1%
4rlyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.56 48.0 3.61e-01 93.0% 49.0%
1vb5A01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.55 34.0 3.79e-01 92.2% 81.9%
4gywA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.54 40.0 4.35e-01 92.2% 96.2%
4rg9B04 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 38.0 4.27e-01 96.1% 100.0%
1elwA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.53 39.0 4.09e-01 89.1% 85.5%
7c1iA01 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.53 35.0 3.94e-01 98.4% 87.0%
4m9aA01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.53 34.0 3.59e-01 79.7% 71.4%
1iygA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.52 37.0 3.70e-01 89.1% 70.7%
5tqbB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 44.0 3.31e-01 95.3% 62.3%
3fm9A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.51 28.0 3.42e-01 90.6% 84.6%
2iqcA00 1.25.40.490 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.51 45.0 4.09e-01 99.2% 76.3%
2wzkA03 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.50 37.0 3.90e-01 76.6% 98.2%
2zm5B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 44.0 3.71e-01 99.2% 97.4%
2pziB03 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.50 39.0 3.74e-01 96.9% 70.7%
2c2uA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.50 39.0 3.53e-01 82.8% 97.2%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3825885 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.61 45.0 4.26e-01 92.2% 63.9%
3358974 109.4.1.1524 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_ZFYVE26 0.60 44.0 3.98e-01 89.8% 55.4%
3306414 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.60 41.0 4.28e-01 82.8% 77.4%
3817317 109.4.1.1267 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.56 47.0 2.85e-01 93.0% 14.3%
3395440 109.4.1.1288 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_11 0.55 41.0 3.49e-01 92.2% 46.5%
3400801 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.55 40.0 3.99e-01 76.6% 88.9%
3829102 109.4.1.1256 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.54 45.0 4.02e-01 92.2% 73.7%
3711332 109.4.1.2340 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rapsyn_N, TPR_8 0.53 41.0 4.08e-01 92.2% 80.0%
5019018 109.4.1.5 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 0.53 41.0 3.95e-01 92.2% 71.3%
1064833 109.4.1.202 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 0.52 39.0 4.00e-01 92.2% 83.2%
3457031 109.4.1.1130 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_BSK1_C 0.52 40.0 3.89e-01 92.2% 74.8%
3607551 109.4.1.3309 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_2, PF30484 0.52 40.0 4.02e-01 92.2% 81.5%
3661047 109.4.1.1290 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_19 0.51 43.0 3.20e-01 93.8% 87.4%
3829739 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 42.0 3.67e-01 88.3% 65.1%
3644382 109.4.1.1437 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC3, TPR_8 0.51 39.0 3.61e-01 92.2% 61.2%
3808659 109.4.1.1300 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_16, TPR_19 0.51 37.0 3.34e-01 76.6% 60.0%
3278778 191.1.1.0 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.51 40.0 3.96e-01 84.4% 80.7%
3491589 109.4.1.1977 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12, TPR_16 0.50 44.0 3.05e-01 100.0% 61.6%