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F-box_incomplete_domain

Euk-Vir

Pandoravirus_salinus

F-box_incomplete_domain__YP_009430029__Pandoravirus_salinus__1349410

Identity

Accession:
YP_009430029 ↗
Protein ID:
F-box_incomplete_domain
Kingdom:
euk

Quality

72.8 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_salinus

TaxID: 1349410

Cluster

View cluster (63 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 90-135
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p1oB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.88 62.0 6.71e-01 73.9% 92.1%
3ogkB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.80 56.0 5.86e-01 73.9% 85.4%
5ejrA01 1.25.40.530 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain 0.66 54.0 3.67e-01 100.0% 72.6%
2qkdA02 2.60.120.1040 Mainly Beta › Sandwich › Jelly Rolls › ZPR1, A/B domain 0.57 41.0 3.03e-01 80.4% 39.3%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3820691 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.94 66.0 7.08e-01 73.9% 85.0%
3238357 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.91 62.0 6.89e-01 71.7% 94.3%
3341479 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 70.0 5.97e-01 89.1% 55.7%
3380603 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.88 65.0 6.58e-01 80.4% 80.0%
4446417 145.1.1.31 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › PF29466 0.88 66.0 6.44e-01 80.4% 74.0%
3239444 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.87 59.0 6.31e-01 71.7% 82.5%
3396134 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.86 61.0 6.66e-01 76.1% 100.0%
3253203 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.85 68.0 6.64e-01 87.0% 86.0%
3665986 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.84 57.0 5.85e-01 71.7% 75.6%
3998412 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.84 65.0 6.80e-01 91.3% 97.5%
3245585 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.84 62.0 6.55e-01 82.6% 92.5%
4011424 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.84 75.0 5.96e-01 100.0% 95.6%
3245275 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 61.0 6.43e-01 80.4% 90.0%
3470430 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.83 60.0 6.26e-01 80.4% 90.0%
3854754 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 61.0 6.47e-01 82.6% 92.5%
3228990 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 56.0 5.86e-01 71.7% 82.5%
3212367 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 58.0 6.11e-01 82.6% 87.5%
3215203 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 58.0 6.11e-01 80.4% 87.5%
3463234 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 64.0 6.05e-01 87.0% 94.5%
3461050 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 59.0 5.80e-01 80.4% 74.0%
3214753 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.80 55.0 5.92e-01 71.7% 94.3%
3217628 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.80 56.0 5.92e-01 76.1% 87.5%
3437176 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 67.0 6.11e-01 100.0% 71.7%
3434959 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.79 64.0 6.52e-01 100.0% 91.1%
3643363 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.78 53.0 5.56e-01 71.7% 85.0%
3727179 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.78 62.0 6.25e-01 93.5% 88.9%
3239855 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.78 59.0 5.96e-01 95.7% 84.4%
3214169 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 57.0 5.78e-01 87.0% 82.2%
3244730 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 58.0 5.91e-01 95.7% 84.4%
3599757 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 53.0 5.74e-01 76.1% 97.1%
3221036 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 55.0 5.57e-01 80.4% 80.0%
3220332 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.76 52.0 5.44e-01 71.7% 82.5%
3821814 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.76 61.0 6.15e-01 87.0% 88.9%
3227162 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.76 53.0 5.55e-01 76.1% 87.5%
3669426 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.76 60.0 6.15e-01 93.5% 93.0%
3303934 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.76 59.0 5.96e-01 87.0% 86.7%
3223353 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 53.0 5.52e-01 80.4% 87.5%
3239562 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 60.0 5.73e-01 91.3% 78.2%
3228948 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 54.0 5.71e-01 82.6% 92.5%
3223932 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.74 52.0 5.40e-01 80.4% 87.5%
3302026 109.4.1.936 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_ULK4 0.74 63.0 4.13e-01 95.7% 53.8%
3377515 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.73 58.0 5.85e-01 87.0% 88.9%
3244551 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.72 51.0 5.41e-01 80.4% 87.5%
4028410 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.72 54.0 5.17e-01 82.6% 89.1%
3218776 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.72 50.0 5.19e-01 73.9% 85.0%
2899589 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.72 62.0 5.35e-01 100.0% 91.9%
3237435 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.72 49.0 5.14e-01 73.9% 85.0%
3228728 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.71 50.0 5.23e-01 78.3% 87.5%
3486259 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.71 60.0 4.85e-01 100.0% 100.0%
3239033 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.70 56.0 5.49e-01 93.5% 84.0%
3218165 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.70 50.0 5.22e-01 80.4% 90.0%
3237331 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.70 54.0 5.31e-01 91.3% 82.0%
3216313 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.70 48.0 5.04e-01 73.9% 87.5%
3507975 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.67 56.0 3.44e-01 100.0% 24.5%
3247452 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.66 46.0 4.70e-01 80.4% 80.0%
3180622 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.66 54.0 5.31e-01 93.5% 86.0%
3257315 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.65 55.0 4.91e-01 100.0% 94.3%
2392419 101.1.1.6 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Death 0.55 43.0 3.47e-01 84.8% 54.1%
4030843 162.1.1.1 ↗ alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD 0.52 44.0 3.32e-01 95.7% 84.5%
D2 medium residues 191-248
PDB
Domain cluster: rep: Ankyrin_repeat_domain_containing_protein__YP_009480689__Pandoravirus_macleodensis__2107707__D456-515