←Back to structures

F-box_incomplete_domain_containing_protein

Euk-Vir

Pandoravirus_dulcis

F-box_incomplete_domain_containing_protein__YP_008319380__Pandoravirus_dulcis__1349409

Identity

Accession:
YP_008319380 ↗
Protein ID:
F-box_incomplete_domain_containing_protein
Kingdom:
euk

Quality

70.4 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_dulcis

TaxID: 1349409

Cluster

View cluster (39 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 81-291
PDB
Domain cluster: rep: F-box_domain_containing_protein__YP_009480767__Pandoravirus_macleodensis__2107707__D109-271
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5eidA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.77 44.0 5.70e-01 96.2% 96.7%
3deoA02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.76 51.0 6.03e-01 99.1% 97.3%
6if3A00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.76 44.0 5.01e-01 98.1% 75.5%
3twqA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.75 45.0 5.06e-01 98.1% 76.2%
2rfmB00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.74 45.0 4.80e-01 100.0% 69.0%
6jd6B00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.73 47.0 4.97e-01 100.0% 70.8%
4cymD00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.73 46.0 5.18e-01 100.0% 80.2%
1s70B02 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.68 37.0 4.69e-01 94.3% 86.8%
4rlyA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.68 47.0 4.11e-01 100.0% 48.7%
7xceA01 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.68 47.0 4.51e-01 100.0% 61.5%
3eu9C00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.67 48.0 4.68e-01 100.0% 67.3%
4uucA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.67 47.0 4.62e-01 100.0% 67.4%
1n11A00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.66 47.0 3.70e-01 100.0% 37.4%
1qymA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.65 46.0 4.55e-01 100.0% 67.7%
3hraA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.65 48.0 4.97e-01 100.0% 79.9%
3uxgA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.65 46.0 5.16e-01 100.0% 92.6%
1ihbA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.64 45.0 5.19e-01 100.0% 96.8%
4hi8A00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.63 44.0 4.82e-01 100.0% 86.5%
2dznA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.63 46.0 4.52e-01 100.0% 69.5%
1k1aA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.62 46.0 4.50e-01 100.0% 70.2%
5aarA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.60 41.0 4.40e-01 100.0% 80.0%
4hbdA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.58 45.0 4.27e-01 100.0% 69.4%
1oxjA02 1.25.40.170 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Smaug, PHAT domain 0.56 30.0 3.93e-01 75.4% 96.3%
2f8xK00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.56 45.0 4.46e-01 100.0% 80.3%
3onhA01 3.10.290.20 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › Ubiquitin-like 2 activating enzyme e1b. Chain: B, domain 3 0.54 23.0 3.01e-01 72.0% 69.4%
1hh8A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.51 35.0 3.65e-01 100.0% 74.0%
3ljnA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.51 43.0 3.80e-01 88.6% 78.3%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3578858 109.3.1.20 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2,Ank_4 0.78 42.0 5.77e-01 94.3% 100.0%
3302715 109.3.1.202 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2, Ank_3, Ank_5 0.77 43.0 5.26e-01 96.2% 82.9%
3909259 109.3.1.164 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 0.76 48.0 4.59e-01 100.0% 55.7%
4493232 109.3.1.165 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4, Ank_5 0.76 48.0 4.41e-01 100.0% 50.8%
3841683 109.3.1.163 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_4, Ank_5 0.75 47.0 3.66e-01 100.0% 30.3%
3559817 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.75 45.0 5.32e-01 98.1% 84.0%
3703905 109.3.1.10 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_4 0.72 39.0 5.32e-01 79.1% 100.0%
3418853 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.72 47.0 4.72e-01 97.6% 64.8%
3725739 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.72 49.0 4.85e-01 100.0% 64.9%
3370231 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.71 42.0 5.35e-01 99.5% 98.4%
4001612 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.69 46.0 5.30e-01 100.0% 89.4%
3735922 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.68 53.0 4.26e-01 100.0% 45.1%
4315375 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.68 38.0 4.89e-01 78.2% 95.0%
4042478 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.67 42.0 3.04e-01 100.0% 24.8%
5063121 109.3.1.8 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_2 0.67 46.0 4.19e-01 100.0% 52.5%
3540503 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.66 47.0 5.13e-01 100.0% 86.3%
3229185 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.66 49.0 5.39e-01 100.0% 92.0%
3572358 109.3.1.165 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4, Ank_5 0.66 47.0 4.26e-01 100.0% 55.9%
3596534 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.65 48.0 4.25e-01 100.0% 53.6%
3636586 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.65 45.0 4.46e-01 100.0% 66.1%
3748996 109.3.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.65 46.0 4.52e-01 100.0% 66.1%
3833157 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.65 45.0 4.34e-01 100.0% 62.6%
3635524 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.65 45.0 3.20e-01 100.0% 25.5%
4014075 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.65 47.0 4.73e-01 100.0% 73.4%
3529957 109.3.1.166 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3 0.64 46.0 4.99e-01 100.0% 86.3%
3514779 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.64 47.0 3.96e-01 100.0% 47.3%
3967836 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.63 48.0 5.10e-01 100.0% 88.1%
3558657 109.3.1.168 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_5 0.63 45.0 3.84e-01 100.0% 47.1%
4873122 109.3.1.96 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank+Ank_2+Ank_4 0.63 45.0 4.36e-01 100.0% 65.1%
3722207 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.61 45.0 4.07e-01 100.0% 55.8%
3780860 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.61 47.0 5.05e-01 100.0% 92.2%
3323532 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.59 45.0 4.12e-01 100.0% 61.5%
4572420 109.3.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 0.59 47.0 4.05e-01 100.0% 53.5%
3195802 109.3.1.186 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_5 0.58 46.0 4.28e-01 100.0% 66.5%
3666560 109.3.1.162 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_5 0.58 50.0 3.95e-01 100.0% 47.2%
3469222 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.56 34.0 4.05e-01 98.6% 90.4%
4001679 109.3.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank 0.56 45.0 3.84e-01 100.0% 53.1%
3464716 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.55 35.0 3.72e-01 100.0% 70.5%
3301232 109.4.1.1258 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2 0.54 32.0 3.90e-01 98.6% 92.3%
3369167 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.54 35.0 3.68e-01 100.0% 71.1%
3423594 109.4.1.1277 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, TPR_24 0.53 37.0 3.52e-01 100.0% 59.6%
3312486 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.53 31.0 3.40e-01 100.0% 68.0%
3465204 109.4.1.1761 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long, E_motif 0.52 34.0 3.33e-01 100.0% 58.3%
3456582 109.4.1.883 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 0.51 32.0 3.81e-01 100.0% 93.6%
3184570 109.3.1.10 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_4 0.50 46.0 3.86e-01 100.0% 58.9%
D2 high residues 294-380
PDB