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F-box_incomplete_domain_containing_protein
Euk-VirPandoravirus_macleodensis
F-box_incomplete_domain_containing_protein__YP_009481168__Pandoravirus_macleodensis__2107707
Identity
- Accession:
- YP_009481168 ↗
- Protein ID:
- F-box_incomplete_domain_containing_protein
- Kingdom:
- euk
Quality
64.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 54-124
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zkrB00 | 1.20.920.50 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.61 | 50.0 | 4.13e-01 | 97.2% | 89.7% |
| 1usyC00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.60 | 55.0 | 3.63e-01 | 100.0% | 32.8% |
| 1qymA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.54 | 44.0 | 3.12e-01 | 90.1% | 41.7% |
| 4uucA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.51 | 41.0 | 2.98e-01 | 90.1% | 43.4% |
| 4s3mB02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.51 | 40.0 | 3.64e-01 | 91.5% | 85.8% |
| 3ehrA02 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.51 | 41.0 | 3.57e-01 | 90.1% | 78.4% |
| 7xceA01 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.51 | 42.0 | 2.90e-01 | 91.5% | 40.2% |
| 2zgdA00 | 1.25.40.20 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain | 0.51 | 39.0 | 3.61e-01 | 85.9% | 89.7% |
| 8amzO01 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.50 | 43.0 | 2.83e-01 | 100.0% | 25.3% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4856365 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.69 | 53.0 | 3.89e-01 | 84.5% | 45.4% |
| 4600617 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.63 | 47.0 | 3.76e-01 | 81.7% | 40.0% |
| 3497710 | 109.4.1.1199 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_Nup160_C | 0.57 | 44.0 | 2.90e-01 | 83.1% | 45.1% |
| 3314756 | 109.4.1.1156 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › E_motif | 0.55 | 43.0 | 3.43e-01 | 85.9% | 59.3% |
| 4941164 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.53 | 36.0 | 2.69e-01 | 70.4% | 56.6% |