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F-box_incomplete_domain_containing_protein
Euk-VirPandoravirus_neocaledonia
F-box_incomplete_domain_containing_protein__YP_009482299__Pandoravirus_neocaledonia__2107708
Identity
- Accession:
- YP_009482299 ↗
- Protein ID:
- F-box_incomplete_domain_containing_protein
- Kingdom:
- euk
Quality
66.5
mean pLDDT
Cluster
View cluster (47 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 551-681
Domain cluster:
rep: hypothetical_protein_pmac_cds_542__YP_009481226__Pandoravirus_macleodensis__2107707__D444-522_546-569
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5dikA00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.66 | 35.0 | 3.73e-01 | 97.7% | 58.0% |
| 3r0sA02 | 1.20.1180.10 | Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain | 0.52 | 26.0 | 3.59e-01 | 94.7% | 100.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3705289 | 138.1.1.2 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › Rep_fac_C | 0.59 | 38.0 | 4.37e-01 | 95.4% | 89.5% |
| 4992090 | 5060.2.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain | 0.54 | 35.0 | 3.67e-01 | 90.8% | 72.2% |
| 4993093 | 316.1.1.18 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii | 0.54 | 39.0 | 2.96e-01 | 100.0% | 30.9% |
D2
medium
residues 349-407
D3
medium
residues 408-509