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F-box_incomplete_domain_containing_protein

Euk-Vir

Pandoravirus_neocaledonia

F-box_incomplete_domain_containing_protein__YP_009482670__Pandoravirus_neocaledonia__2107708

Identity

Accession:
YP_009482670 ↗
Protein ID:
F-box_incomplete_domain_containing_protein
Kingdom:
euk

Quality

79.0 mean pLDDT

Taxonomy

Pandoravirus› Pandoravirus_neocaledonia

TaxID: 2107708

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 51-136
PDB
Domain cluster: rep: Ankyrin_repeat_domain_containing_protein__YP_009480689__Pandoravirus_macleodensis__2107707__D456-515
D2 medium residues 7-44
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF12937.13 best F-box-like 28.4 1.50e-06 97.4% 68.1%
PF00646.39 F-box 26.1 8.10e-06 86.8% 65.1%
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p1oB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.89 72.0 7.24e-01 89.5% 92.1%
3ogkB01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.87 70.0 6.88e-01 89.5% 85.4%
1fs2A00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.86 78.0 4.60e-01 100.0% 25.5%
5ibkB00 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.85 70.0 6.71e-01 97.4% 80.4%
2e31A01 1.20.1280.50 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.78 67.0 5.77e-01 100.0% 85.5%
2ixnA02 1.20.120.1150 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Phosphotyrosyl phosphate activator, C-terminal lid domain 0.68 50.0 3.74e-01 100.0% 29.9%
3htmA02 6.10.250.3030 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.65 53.0 5.29e-01 100.0% 97.5%
1ku9A02 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.62 43.0 3.75e-01 73.7% 43.8%
3g0tA01 3.90.1150.100 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.60 47.0 3.17e-01 92.1% 100.0%
2aswA00 1.10.8.500 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › HAMP domain in histidine kinase 0.57 47.0 4.27e-01 100.0% 75.0%
2jx4A01 6.10.140.460 Special › Helix non-globular › Helix Hairpins › 0.55 41.0 3.92e-01 86.8% 75.0%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3825169 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.98 82.0 7.69e-01 89.5% 75.6%
3349711 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.95 81.0 7.60e-01 92.1% 77.8%
3341479 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.95 86.0 6.89e-01 100.0% 54.3%
3820691 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.93 76.0 7.47e-01 89.5% 85.0%
4061448 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.93 82.0 4.75e-01 100.0% 20.7%
3399970 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.92 81.0 4.86e-01 100.0% 16.2%
3359788 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.91 70.0 5.96e-01 84.2% 53.3%
3212367 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.90 75.0 7.38e-01 97.4% 87.5%
3680688 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.90 79.0 4.41e-01 100.0% 14.1%
3456290 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.90 78.0 6.39e-01 100.0% 85.7%
2389764 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.89 77.0 7.34e-01 100.0% 82.2%
3568879 207.1.1.134 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6, DUF7885 0.89 77.0 4.33e-01 100.0% 9.6%
3645833 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.89 69.0 6.83e-01 86.8% 82.5%
3239444 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.89 69.0 6.88e-01 86.8% 82.5%
3635440 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.88 77.0 7.05e-01 100.0% 76.0%
3843694 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.88 76.0 4.85e-01 100.0% 21.2%
3621592 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.87 75.0 6.90e-01 100.0% 78.0%
3664817 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.87 79.0 6.05e-01 100.0% 80.0%
3360537 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.87 74.0 7.34e-01 97.4% 97.5%
3224057 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.87 70.0 6.94e-01 97.4% 87.5%
3803894 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.87 73.0 5.86e-01 100.0% 49.3%
3501462 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.86 74.0 7.34e-01 97.4% 90.0%
3380603 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.86 71.0 6.82e-01 94.7% 80.0%
3793366 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.86 68.0 6.72e-01 89.5% 85.0%
3245585 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.86 73.0 7.21e-01 100.0% 92.5%
3227830 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.86 70.0 6.93e-01 97.4% 87.5%
3550264 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.86 71.0 7.00e-01 97.4% 87.5%
3463234 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.86 75.0 6.68e-01 100.0% 92.7%
4000706 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.86 75.0 6.81e-01 100.0% 74.0%
3758711 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.85 71.0 7.04e-01 97.4% 90.0%
3389442 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.85 71.0 6.84e-01 100.0% 82.2%
3215203 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.85 68.0 6.79e-01 97.4% 87.5%
3238357 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.85 65.0 6.73e-01 86.8% 94.3%
3240954 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.85 68.0 6.72e-01 94.7% 87.5%
3216638 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.85 65.0 6.46e-01 86.8% 82.5%
3669426 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.84 75.0 7.21e-01 100.0% 93.0%
3461050 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.84 70.0 6.49e-01 97.4% 74.0%
3396134 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.84 66.0 6.79e-01 92.1% 100.0%
3886321 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 74.0 5.76e-01 100.0% 76.2%
3646855 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.84 70.0 6.70e-01 97.4% 86.7%
3574675 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.84 66.0 6.74e-01 94.7% 97.1%
3515309 207.1.1.79 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box 0.83 72.0 4.08e-01 100.0% 16.7%
3230376 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.83 71.0 3.96e-01 100.0% 14.1%
3406707 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.83 66.0 6.54e-01 92.1% 87.5%
3628631 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.83 70.0 6.04e-01 97.4% 61.7%
3407033 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.83 72.0 5.75e-01 100.0% 78.7%
3856479 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.82 73.0 4.09e-01 100.0% 16.8%
3730054 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.82 72.0 5.90e-01 100.0% 57.1%
3400371 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 70.0 5.27e-01 100.0% 80.0%
3236811 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.82 69.0 6.58e-01 100.0% 82.2%
3817535 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.81 69.0 4.02e-01 100.0% 18.6%
3257387 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.81 70.0 5.42e-01 100.0% 69.4%
3470430 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.81 68.0 6.71e-01 97.4% 92.5%
3931145 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.81 66.0 6.54e-01 97.4% 90.0%
3837673 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.80 66.0 6.29e-01 97.4% 80.0%
3527636 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.80 68.0 5.24e-01 100.0% 77.5%
3601442 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.80 67.0 5.69e-01 97.4% 93.8%
3214753 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.80 60.0 6.19e-01 86.8% 94.3%
3686935 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.80 70.0 5.12e-01 100.0% 38.0%
3220332 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.80 61.0 6.06e-01 86.8% 82.5%
3628163 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.80 68.0 5.75e-01 100.0% 61.5%
3236326 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 60.0 6.03e-01 92.1% 85.0%
3243910 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 61.0 5.68e-01 89.5% 68.0%
3436290 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 67.0 5.75e-01 100.0% 85.9%
4021018 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.79 69.0 3.73e-01 100.0% 43.6%
3226289 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.79 62.0 6.16e-01 97.4% 87.5%
4073598 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.79 66.0 5.66e-01 100.0% 64.6%
3639671 207.1.1.85 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › F-box-like 0.79 66.0 3.66e-01 100.0% 7.6%
3454872 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.78 67.0 6.18e-01 100.0% 80.0%
3236632 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 58.0 5.78e-01 86.8% 85.0%
3737703 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.77 63.0 5.92e-01 100.0% 80.0%
3235962 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.77 58.0 5.80e-01 86.8% 85.0%
3237331 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.77 62.0 5.79e-01 97.4% 74.0%
3218776 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.76 60.0 5.97e-01 92.1% 87.5%
3236013 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.76 57.0 5.70e-01 86.8% 85.0%
3228948 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 61.0 6.12e-01 100.0% 92.5%
3223353 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.75 59.0 5.90e-01 97.4% 90.0%
3852694 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.75 61.0 3.78e-01 100.0% 27.1%
3223932 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.74 58.0 5.78e-01 97.4% 87.5%
4028410 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.73 63.0 5.62e-01 100.0% 89.1%
3237435 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.73 55.0 5.47e-01 86.8% 85.0%
3226258 3180.1.1.2 ↗ a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › F-box 0.73 55.0 4.10e-01 86.8% 31.4%
3218165 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.71 57.0 5.67e-01 97.4% 90.0%
3244551 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.71 56.0 5.58e-01 97.4% 87.5%
3803973 145.1.1.3 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like 0.70 59.0 4.91e-01 100.0% 88.6%
3228728 145.1.1.1 ↗ alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.69 54.0 5.35e-01 94.7% 87.5%