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F8
Euk-VirFelis_catus_gammaherpesvirus_1
F8__YP_009173879__Felis_catus_gammaherpesvirus_1__1452540
Identity
- Accession:
- YP_009173879 ↗
- Protein ID:
- F8
- Kingdom:
- euk
Quality
70.7
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Percavirus›
Felid_gammaherpesvirus_1
TaxID: 1452540
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-55
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tlqA00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.66 | 54.0 | 3.63e-01 | 96.4% | 98.7% |
| 1f0cA02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.59 | 45.0 | 3.64e-01 | 87.3% | 44.1% |
| 4zk3A02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.56 | 42.0 | 3.39e-01 | 87.3% | 41.7% |
| 1qmnA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.56 | 42.0 | 3.28e-01 | 87.3% | 35.7% |
| 1imvA01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.54 | 44.0 | 3.24e-01 | 96.4% | 43.8% |
| 1hp7A01 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.54 | 41.0 | 3.54e-01 | 87.3% | 50.5% |
| 3ihlB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 41.0 | 2.83e-01 | 89.1% | 33.2% |
| 2kz0A01 | 3.30.300.90 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › BolA-like | 0.54 | 36.0 | 3.41e-01 | 70.9% | 63.4% |
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 35.0 | 2.79e-01 | 74.5% | 31.8% |
| 3q9tA02 | 3.30.560.10 | Alpha Beta › 2-Layer Sandwich › Glucose Oxidase; domain 3 › Glucose Oxidase, domain 3 | 0.51 | 38.0 | 2.51e-01 | 90.9% | 31.1% |
| 1ihjA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.50 | 34.0 | 3.00e-01 | 72.7% | 58.5% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1224463 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.60 | 37.0 | 3.86e-01 | 74.5% | 69.4% |
| 2794605 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.59 | 37.0 | 4.04e-01 | 74.5% | 82.9% |
| 4927838 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 37.0 | 3.64e-01 | 76.4% | 61.7% |
| 3580330 | 3519.1.1.0 ↗ | beta complex topology › Myoferlin inner DysF domain › Myoferlin inner DysF domain › Myoferlin inner DysF domain | 0.56 | 42.0 | 3.70e-01 | 92.7% | 65.0% |
| 4032294 | 3389.1.1.1 ↗ | a+b two layers › hypothetical protein SAV0303 › hypothetical protein SAV0303 › hypothetical protein SAV0303 › DUF4467 | 0.54 | 42.0 | 3.58e-01 | 89.1% | 56.1% |
| 3721350 | 312.1.1.11 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › Ap4A_phos_N | 0.53 | 39.0 | 2.80e-01 | 78.2% | 26.9% |
| 4012247 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 40.0 | 2.65e-01 | 85.5% | 22.4% |
| 4615993 | 4313.1.1.1 ↗ | beta duplicates or obligate multimers › CsrA-like › CsrA-like › CsrA-like › CsrA | 0.52 | 31.0 | 2.97e-01 | 72.7% | 45.7% |
| 3370517 | 109.1.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 | 0.51 | 36.0 | 2.67e-01 | 74.5% | 65.6% |
| 3739982 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.51 | 40.0 | 2.56e-01 | 85.5% | 21.1% |
| 3609014 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.51 | 39.0 | 2.67e-01 | 87.3% | 32.6% |
| 4930010 | 1.1.7.141 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MazE_antitoxin | 0.51 | 37.0 | 3.26e-01 | 92.7% | 49.5% |
| 3960522 | 245.1.1.0 ↗ | a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 | 0.50 | 40.0 | 3.72e-01 | 98.2% | 85.0% |