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FAD-dependent_thymidylate_synthase

Euk-Vir

Heterosigma_akashiwo_virus_01

FAD-dependent_thymidylate_synthase__YP_009507550__Heterosigma_akashiwo_virus_01__97195

Identity

Accession:: YP_009507550 ↗
Protein ID:: FAD-dependent_thymidylate_synthase
Kingdom:: euk

Quality

84.6 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Algavirales› Phycodnaviridae› Raphidovirus› Heterosigma_akashiwo_virus_01

TaxID: 97195

Cluster

View cluster (33 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-99_179-233

PDB

Domain cluster: rep: IMGVR_UViG_3300025156_000428-3300025156-Ga0209834_1000016635__D1-193

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02511.21 best	Thy1	87.6	1.30e-24	57.7%	45.0%
PF02511.21	Thy1	46.5	5.00e-12	31.5%	23.6%

D2 high residues 114-173

PDB

Domain cluster: representative

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1kq4A00	3.30.1360.170	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 ›	0.87	65.0	4.35e-01	100.0%	23.2%
4p5aC00	3.30.1360.170	Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 ›	0.84	74.0	4.90e-01	100.0%	26.0%
3k4iC02	1.20.5.3070	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.83	51.0	6.22e-01	100.0%	100.0%
4lctB00	1.25.40.570	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.74	58.0	3.56e-01	85.0%	30.2%
3v9rB00	1.10.20.10	Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A	0.70	63.0	5.90e-01	100.0%	81.9%
1s2gB00	3.40.50.450	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold ›	0.51	41.0	2.94e-01	86.7%	83.8%

ECOD (11)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5069296	842.1.1.1 ↗	a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1	0.87	53.0	3.35e-01	96.7%	14.5%
1716752	842.1.1.1 ↗	a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1	0.84	74.0	4.91e-01	100.0%	25.7%
4930198	605.1.1.2 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › H-kinase_dim	0.80	52.0	5.22e-01	98.3%	66.7%
5015585	5054.1.1.6 ↗	alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH	0.79	59.0	4.70e-01	93.3%	41.6%
4987757	5054.1.1.6 ↗	alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH	0.79	59.0	4.91e-01	95.0%	46.2%
5013251	3291.1.1.195 ↗	alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › H-kinase_dim	0.76	53.0	3.99e-01	76.7%	30.8%
3166522	109.4.1.152 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RPN7	0.76	59.0	3.66e-01	85.0%	33.0%
4667663	148.1.1.96 ↗	alpha arrays › Histone-like › Histone-related › Histone › Bromo_TP_like	0.72	65.0	5.62e-01	100.0%	65.6%
4857394	5054.1.1.6 ↗	alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH	0.71	63.0	4.88e-01	96.7%	48.4%
3565991	109.4.1.1415 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BCD_RFX	0.66	54.0	3.38e-01	88.3%	62.6%
3373588	3887.2.1.1 ↗	a+b two layers › Yeast killer toxin-like › Antifungal protein ginkbilobin-2 › Antifungal protein ginkbilobin-2 › Stress-antifung	0.64	52.0	4.19e-01	91.7%	80.0%

D3 medium residues 241-276

PDB