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FFC_09252017_16_scaffold_13_prodigal-single.1__X__X__00076
Bact-VirFFC_09252017_16_scaffold_13_prodigal-single.1__X__X__00076
Identity
- Kingdom:
- phage
Quality
79.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-226
Domain cluster:
rep: MK308677.1__QAX97145.1__X__00201__D6-173
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8bauA01 | 1.10.357.40 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › YbiA-like | 0.78 | 56.0 | 5.78e-01 | 74.3% | 100.0% |
| 2b3wA00 | 1.10.357.40 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › YbiA-like | 0.77 | 56.0 | 5.96e-01 | 75.4% | 87.5% |
| 2uubT00 | 1.20.58.110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 | 0.54 | 22.0 | 2.92e-01 | 72.2% | 67.7% |
| 2jynA01 | 1.10.3560.10 | Mainly Alpha › Orthogonal Bundle › yst0336 like fold › yst0336 like domain | 0.50 | 32.0 | 3.64e-01 | 80.7% | 85.3% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3998019 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.77 | 58.0 | 5.93e-01 | 77.0% | 87.8% |
| 3600506 | 4308.1.1.0 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like | 0.75 | 58.0 | 6.48e-01 | 81.8% | 98.7% |
| 3281506 | 4308.1.1.1 ↗ | a+b complex topology › YbiA-like › YbiA-like › YbiA-like › NADAR | 0.74 | 58.0 | 6.44e-01 | 82.9% | 100.0% |
| 2995032 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.56 | 23.0 | 2.92e-01 | 84.5% | 60.6% |
| 3599123 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 39.0 | 3.28e-01 | 79.1% | 76.3% |