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FFC_09252017_16_scaffold_13_prodigal-single.1__X__X__00199
Bact-VirFFC_09252017_16_scaffold_13_prodigal-single.1__X__X__00199
Identity
- Kingdom:
- phage
Quality
48.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-111
D2
medium
residues 116-196
Domain cluster:
rep: NC_028899.1__YP_009207974.1__AVU11_gp170__00176__D88-154
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25613.2 best | DUF7941 | 33.4 | 4.60e-08 | 98.8% | 20.9% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2kk8A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 41.0 | 4.27e-01 | 92.6% | 91.8% |
| 3uaqB02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 44.0 | 3.60e-01 | 100.0% | 89.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4219507 | 523.1.1.1 ↗ | a+b two layers › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal protein L9 C-domain › Ribosomal_L9_C | 0.63 | 53.0 | 5.14e-01 | 100.0% | 84.4% |
| 3575531 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.62 | 49.0 | 4.78e-01 | 88.9% | 92.5% |
| 3486011 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 42.0 | 4.23e-01 | 92.6% | 83.5% |
| 3175156 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.50 | 35.0 | 3.72e-01 | 82.7% | 87.1% |
D3
medium
residues 312-467
D4
medium
residues 468-513_532-558