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FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00010

Bact-Vir

FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00010

Identity

Kingdom:
phage

Quality

89.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-65
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3c12A01 2.30.30.910 Mainly Beta › Roll › SH3 type barrels. › 0.85 59.0 6.06e-01 100.0% 76.5%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 62.0 5.79e-01 100.0% 71.2%
3lx7A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 56.0 5.92e-01 100.0% 91.3%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.76 59.0 5.43e-01 100.0% 65.2%
3kbgA03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 59.0 5.83e-01 100.0% 80.4%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.74 58.0 6.02e-01 100.0% 93.8%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.72 63.0 5.92e-01 100.0% 80.0%
2f5tX02 2.30.30.690 Mainly Beta › Roll › SH3 type barrels. › 0.72 63.0 5.36e-01 100.0% 71.1%
4qqgG00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 62.0 5.66e-01 100.0% 80.6%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 58.0 5.99e-01 98.1% 100.0%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 59.0 5.69e-01 100.0% 83.9%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 55.0 5.10e-01 100.0% 70.6%
1m9sA03 2.30.30.170 Mainly Beta › Roll › SH3 type barrels. › 0.67 58.0 5.25e-01 100.0% 89.3%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.66 56.0 4.15e-01 100.0% 39.1%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 55.0 5.23e-01 100.0% 79.0%
3teeA02 2.30.30.760 Mainly Beta › Roll › SH3 type barrels. › 0.65 55.0 4.96e-01 96.2% 68.5%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 55.0 5.08e-01 100.0% 80.8%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 46.0 4.83e-01 100.0% 93.6%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 53.0 5.19e-01 100.0% 95.0%
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.62 45.0 3.42e-01 77.4% 52.4%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 52.0 4.65e-01 100.0% 73.1%
2ra9A02 2.30.270.10 Mainly Beta › Roll › duf1285 protein fold › duf1285 protein 0.59 49.0 4.43e-01 100.0% 68.5%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.59 49.0 4.10e-01 96.2% 82.5%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.58 50.0 4.50e-01 100.0% 70.1%
3npfA02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 51.0 4.67e-01 100.0% 88.6%
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 48.0 4.46e-01 100.0% 75.7%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.57 48.0 4.54e-01 100.0% 77.3%
6g6qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 47.0 3.44e-01 92.5% 38.9%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 46.0 4.32e-01 100.0% 81.4%
1d8cA02 2.170.170.11 Mainly Beta › Beta Complex › Malate synthase G - maily-beta sub-domain › Malate synthase G - maily-beta sub-domain 0.56 41.0 3.18e-01 94.3% 33.6%
2gumB03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.55 48.0 3.73e-01 100.0% 82.6%
3omlA03 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.55 45.0 2.87e-01 90.6% 47.5%
6nvxB02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.54 38.0 3.48e-01 77.4% 85.7%
2hqvA00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.54 44.0 3.21e-01 100.0% 47.7%
2krsA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 44.0 4.30e-01 96.2% 100.0%
1xhnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 46.0 3.32e-01 100.0% 37.3%
1a78A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 42.0 3.20e-01 90.6% 58.2%
2cduA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 46.0 3.35e-01 100.0% 81.5%
4b1bA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 48.0 2.79e-01 100.0% 19.7%
2ymsC00 2.40.10.480 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.52 44.0 3.95e-01 94.3% 69.3%
2b2cA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.52 42.0 4.03e-01 94.3% 90.6%
2v3aA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 45.0 3.44e-01 100.0% 91.1%
4pdyA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 45.0 3.68e-01 100.0% 64.6%
3o0hB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 44.0 3.48e-01 100.0% 97.4%
1xdiA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 44.0 3.42e-01 100.0% 73.1%
1gv4A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 43.0 3.13e-01 100.0% 78.9%
2xdoD00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 45.0 2.72e-01 100.0% 40.1%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.50 39.0 3.43e-01 94.3% 96.8%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3230533 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.86 60.0 6.43e-01 100.0% 86.7%
4076879 4.1.1.87 beta barrels › SH3 › SH3 › SH3 › FLgD_tudor 0.83 61.0 6.25e-01 100.0% 82.0%
5017637 4.1.1.458 beta barrels › SH3 › SH3 › SH3 › DUF2098 0.80 59.0 5.91e-01 100.0% 76.4%
4932404 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.80 73.0 5.07e-01 100.0% 37.5%
4110878 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 62.0 6.66e-01 98.1% 100.0%
5073807 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.77 69.0 5.12e-01 100.0% 51.5%
4936914 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.75 69.0 5.38e-01 100.0% 53.3%
3468141 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.72 46.0 3.09e-01 96.2% 18.9%
4183853 4.1.1.435 beta barrels › SH3 › SH3 › SH3 › PF29216 0.72 64.0 5.87e-01 100.0% 85.7%
3821287 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.72 63.0 4.64e-01 100.0% 44.3%
3901117 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.71 64.0 4.35e-01 100.0% 30.6%
3936885 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 56.0 5.32e-01 98.1% 73.8%
3934278 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 62.0 4.83e-01 100.0% 50.4%
4272564 4.1.1.17 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.70 61.0 4.87e-01 100.0% 57.4%
3450257 4.1.1.150 beta barrels › SH3 › SH3 › SH3 › DUF3123 0.68 58.0 4.84e-01 98.1% 66.3%
5025498 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.68 59.0 4.99e-01 100.0% 68.9%
5043979 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 57.0 5.34e-01 100.0% 82.9%
3953109 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.68 58.0 4.84e-01 100.0% 64.2%
4545520 4.7.1.7 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › WYL 0.67 57.0 4.97e-01 100.0% 71.8%
3281271 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.67 56.0 4.86e-01 100.0% 65.6%
4302391 4.1.1.398 beta barrels › SH3 › SH3 › SH3 › YolD 0.66 56.0 5.28e-01 98.1% 78.5%
1005326 3174.2.1.1 beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA › ChapFlgA 0.65 55.0 5.17e-01 96.2% 78.1%
3602511 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 52.0 4.86e-01 100.0% 70.0%
3188712 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.65 55.0 4.61e-01 100.0% 73.0%
3712451 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 53.0 4.22e-01 100.0% 50.4%
3714156 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 53.0 4.66e-01 100.0% 62.4%
5028741 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 52.0 5.22e-01 100.0% 90.9%
4238582 3174.2.1.1 beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA › ChapFlgA 0.63 52.0 5.04e-01 96.2% 83.3%
4096587 3174.2.1.2 beta barrels › Ribosomal protein L14-like › Barrel domain in flagellar protein FlgA › Barrel domain in flagellar protein FlgA › OrtA 0.62 54.0 4.61e-01 100.0% 70.0%
3584571 4.1.1.56 beta barrels › SH3 › SH3 › SH3 › RBB1NT 0.62 47.0 3.18e-01 100.0% 20.0%
4001172 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.62 52.0 4.86e-01 100.0% 82.9%
3392529 719.2.1.1 beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.61 51.0 4.36e-01 96.2% 88.9%
3537919 719.2.1.1 beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.61 52.0 4.38e-01 96.2% 86.7%
3764432 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 47.0 4.52e-01 100.0% 73.8%
4071824 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.60 52.0 4.71e-01 100.0% 72.0%
3419491 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 51.0 5.00e-01 100.0% 93.3%
4520767 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.60 52.0 4.77e-01 98.1% 87.1%
3546309 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.58 48.0 4.44e-01 100.0% 76.0%
4147290 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.58 41.0 3.91e-01 100.0% 64.6%
3790212 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 49.0 3.13e-01 94.3% 23.3%
3918280 5.1.4.255 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD 0.57 49.0 2.92e-01 96.2% 21.3%
5053906 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.56 42.0 4.17e-01 100.0% 78.3%
3180573 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 45.0 3.90e-01 100.0% 69.5%
3413140 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.55 41.0 2.88e-01 83.0% 66.3%
3924808 719.2.1.0 beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like 0.55 45.0 3.97e-01 92.5% 82.5%
3744704 5.1.4.173 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_2nd 0.55 47.0 2.81e-01 94.3% 22.7%
3396896 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 45.0 4.14e-01 100.0% 70.7%
3742310 5.1.4.38 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.55 46.0 2.84e-01 94.3% 27.2%
3213122 4184.1.1.0 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.54 43.0 3.64e-01 100.0% 49.5%
3604573 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.54 47.0 2.61e-01 96.2% 49.1%
3511505 9.23.1.6 beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › DUF7042 0.53 46.0 3.56e-01 98.1% 76.7%
3833703 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 41.0 2.48e-01 94.3% 33.4%
4099755 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.53 46.0 2.72e-01 98.1% 33.5%
5000741 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.52 43.0 4.11e-01 100.0% 81.5%
3522563 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.52 31.0 3.40e-01 75.5% 75.0%
3458035 2003.1.2.49 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 0.52 48.0 2.83e-01 100.0% 36.1%
3692391 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.52 48.0 2.80e-01 100.0% 36.0%
5033675 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.52 48.0 2.84e-01 100.0% 36.1%
3422047 2003.1.2.49 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 0.52 48.0 2.96e-01 100.0% 44.9%
3382511 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.52 48.0 2.81e-01 100.0% 41.6%
3028534 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.51 47.0 3.22e-01 100.0% 84.4%
None 0.51 47.0 2.90e-01 100.0% 43.1%
3662319 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.51 41.0 3.76e-01 100.0% 72.5%
4024501 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 40.0 3.47e-01 100.0% 75.2%
4593126 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.51 46.0 2.74e-01 100.0% 39.4%
3726123 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.51 46.0 2.69e-01 100.0% 39.1%
3280838 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.50 44.0 2.62e-01 98.1% 35.7%
4511789 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.50 45.0 2.65e-01 100.0% 34.1%
4948974 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.50 45.0 3.27e-01 100.0% 70.4%