Back to structures

FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00016

Bact-Vir

FFC_09252017_16_scaffold_2_prodigal-single.1__X__X__00016

Identity

Kingdom:
phage

Quality

79.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 97-216
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01464.26 best SLT 43.2 3.60e-11 93.3% 76.9%
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hjzA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.89 84.0 7.11e-01 98.3% 89.1%
4yibA01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.88 84.0 7.55e-01 100.0% 89.2%
1qsaA03 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.88 84.0 7.26e-01 100.0% 84.4%
4c5fA02 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.88 84.0 7.32e-01 100.0% 98.2%
2xqoA00 1.10.530.60 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.84 80.0 6.45e-01 100.0% 74.8%
6cfcA01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.82 78.0 6.95e-01 100.0% 91.3%
3bkhA02 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.82 76.0 6.48e-01 98.3% 92.9%
153lA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.80 75.0 6.38e-01 100.0% 71.9%
3w6bB00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.79 74.0 6.77e-01 100.0% 88.9%
7k5cB01 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.78 70.0 6.34e-01 95.8% 83.0%
2dqaA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.77 69.0 6.91e-01 97.5% 99.2%
6ukcA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.70 65.0 6.26e-01 100.0% 89.5%
4yf2A00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.70 62.0 6.09e-01 100.0% 88.5%
1hfxA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.69 60.0 5.99e-01 100.0% 91.1%
8b2sA01 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.66 55.0 5.03e-01 88.3% 96.1%
6v3zA00 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.59 47.0 4.15e-01 85.0% 98.3%
3vayA02 1.20.120.1600 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.57 40.0 4.61e-01 97.5% 98.9%
1e7uA05 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.52 36.0 3.09e-01 77.5% 44.5%
5vc2A02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 38.0 3.69e-01 78.3% 86.5%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4530587 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.89 83.0 6.97e-01 96.7% 87.0%
3964630 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.88 79.0 7.00e-01 99.2% 68.3%
3965879 235.1.1.32 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT, PF27553 0.88 84.0 7.41e-01 100.0% 85.5%
3317412 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.88 84.0 6.90e-01 100.0% 69.5%
3978377 235.1.1.0 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.88 85.0 6.97e-01 100.0% 82.6%
3947473 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.88 84.0 7.65e-01 100.0% 84.7%
3985073 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.87 83.0 7.92e-01 100.0% 92.6%
3971115 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.87 83.0 7.22e-01 100.0% 89.4%
4431057 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.87 83.0 7.68e-01 100.0% 91.0%
3385979 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.86 81.0 6.79e-01 100.0% 74.7%
3944103 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.85 81.0 6.90e-01 100.0% 84.4%
3945171 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.85 80.0 7.42e-01 99.2% 83.4%
3945340 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.85 74.0 6.81e-01 91.7% 98.0%
2390909 235.1.1.27 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Cel124_C 0.84 80.0 6.44e-01 100.0% 74.4%
4010532 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.84 79.0 7.71e-01 99.2% 99.2%
3838879 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.84 79.0 7.29e-01 100.0% 91.9%
3839661 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.83 78.0 6.85e-01 100.0% 87.6%
3691757 235.1.1.0 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.81 76.0 5.92e-01 98.3% 64.3%
3254511 235.1.1.1 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys 0.80 61.0 6.54e-01 98.3% 90.5%
3978932 235.1.1.35 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › DUF1615 0.80 75.0 6.20e-01 100.0% 89.4%
3692876 235.1.1.0 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.80 74.0 6.35e-01 98.3% 78.3%
4009649 632.3.1.13 alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain › DUF1615 0.79 74.0 6.66e-01 100.0% 83.6%
3582448 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.79 70.0 6.81e-01 92.5% 90.0%
1266923 235.1.1.0 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.79 75.0 6.82e-01 100.0% 90.1%
1005039 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.79 75.0 6.70e-01 100.0% 86.1%
4034362 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.78 58.0 6.02e-01 75.8% 95.5%
3222819 235.1.1.12 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Destabilase 0.78 68.0 6.64e-01 92.5% 97.7%
4031083 235.1.1.14 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Transglycosylas 0.76 50.0 6.03e-01 89.2% 100.0%
3587750 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.72 58.0 6.19e-01 92.5% 96.2%
3279121 235.1.1.9 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.72 52.0 5.79e-01 90.0% 95.7%
3245104 235.1.1.12 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Destabilase 0.71 65.0 6.41e-01 99.2% 99.2%
83283 235.1.1.1 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys 0.69 60.0 6.02e-01 100.0% 91.1%
150591 235.1.1.1 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys 0.69 59.0 5.98e-01 100.0% 91.7%
3398878 235.1.1.1 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys 0.68 59.0 5.98e-01 100.0% 93.3%
82935 235.1.1.1 a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Lys 0.68 63.0 5.99e-01 100.0% 90.6%
3301182 148.1.3.19 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 0.65 35.0 4.31e-01 78.3% 84.0%
5054493 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.63 42.0 3.45e-01 94.2% 38.5%